Author

J. Labbe

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Plant Biology· 2 Ecology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

G. A. Tuskan· 2 shared A. DeLeon· 1 shared A. Kuo· 1 shared A. Lipzen· 1 shared A. Matthiadis· 1 shared A. P. Kohler· 1 shared A. Tritt· 1 shared B. Henrissat· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersPlant Biology

G. A. Tuskan

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Plant-based biosensors for detecting CRISPR-mediated genome engineering

G. Yuan, M. M. Hassan, T. Yao, H. Lu, M. M. Vergara, J. Labbe, W. Muchero, C. Pan, J.-G. Chen, G. A. Tuskan, Y. Qi, P. E. Abraham, X. Yang

This study develops plant-based biosensors to detect CRISPR/Cas tools in real-time, demonstrating their effectiveness in detecting various CRISPR functions in multiple plant species.

bioRxiv · Sep 27, 2021Plant Biology

Evolutionary priming and transition to the ectomycorrhizal habit in an iconic lineage of mushroom-forming fungi: is preadaptation a requirement?

B. P. Looney, S. Miyauchi, E. Morin, P.-E. Courty, A. P. Kohler, E. Lindquist, A. Kuo, K. LaButti, J. Pangilinan, A. Lipzen, R. Riley, W. Andreopoulos, G. He, J. Johnson, M. Nolan, , F. M. Martin

This study identifies genomic features of the transition to ectomycorrhizal habit in Russulaceae fungi, finding gene loss, TE expansion, and secreted protein associations with TE nests.

bioRxiv · Feb 23, 2021 · PreprintEvolutionary Biology

Host auxin machinery is important in mediating root architecture changes induced by Pseudomonas fluorescens GM30 and Serendipita indica

A. Matthiadis, P. Sukumar, A. DeLeon, D. Pelletier, J. Labbe, G. A. Tuskan, U. C. Kalluri

This study investigates how host auxin signaling and transport components mediate root architecture changes induced by beneficial microbes, identifying key proteins involved in the process.

bioRxiv · Aug 17, 2020 · PreprintPlant Biology

Phylogenetic diversity of 200+ isolates of the ectomycorrhizal fungus Cenococcum geophilum associated with Populus trichocarpa soils in the Pacific Northwest, USA and comparison to globally distributed representatives

J. Velez, R. Morris, R. Vilgalys, J. Labbe, C. W. Schadt

The paper analyzes phylogenetic diversity of Cenococcum geophilum isolates from Populus trichocarpa soils in the Pacific Northwest and globally distributed isolates, revealing cryptic species and recombination patterns.

bioRxiv · Mar 24, 2020Ecology