Author

J.-M. Ane

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 5 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 6 Research Focus:cell type annotation· 3 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1

Frequent Co-Authors

M. Kirst· 5 shared C. Dervinis· 4 shared D. Conde· 4 shared H. W. Schmidt· 4 shared K. M. Balmant· 4 shared S. Chakraborty· 4 shared W. J. Pereira· 4 shared P. M. Triozzi· 3 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersPlant Biology

M. Kirst

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Mucilage Produced by Sorghum 1 (Sorghum bicolor) Aerial Roots Hosts Diazotrophs that Provide Significant Amounts of Nitrogen to the Plant

R. E. Venado, J. Wilker, V. Pankievicz, V. Infante, A. MacIntyre, E. Wolf, S. Vela, F. A. Robbins, P. I. Fernandes-Junior, W. Vermerris, J.-M. Ane

This study identifies diazotrophs in sorghum aerial root mucilage that supply 40% of the plant's nitrogen, offering a sustainable alternative to synthetic fertilizers.

bioRxiv · Aug 5, 2023 · PreprintPlant Biology

The Single-Cell Transcriptome Program of Nodule Development Cellular Lineages in Medicago truncatula

W. J. Pereira, J. Boyd, D. Conde, P. M. Triozzi, K. M. Balmant, C. Dervinis, H. W. Schmidt, C. Boaventura-Novaes, S. Chakraborty, S. A. Knaack, Y. Gao, F. A. Feltus, S. Roy, J.-M. Ane, J. Frugoli, M. Kirst

The paper characterizes single-cell transcriptomes during Medicago truncatula nodule development, revealing dynamic changes in auxin and cytokinin signaling pathways across cell lineages.

bioRxiv · Jun 13, 2023 · PreprintPlant Biology

Two shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants

H. Kates, B. C. O'Meara, R. LaFrance, G. W. Stull, E. K. James, S. Liu, Q. Tan, T. Yi, J.-M. Ane, D. Conde, M. Kirst, D. E. Soltis, R. P. Guralnick, P. S. Soltis, R. A. Folk

The paper reconstructs the evolutionary history of root-nodule symbiosis in the nitrogen-fixing clade, identifying a two-step process involving shifts in evolutionary lability that explain multiple independent gains and losses of the trait.

bioRxiv · Jul 31, 2022 · PreprintEvolutionary Biology

Temporal change in chromatin accessibility predicts regulators of nodulation in Medicago truncatula

S. A. Knaack, D. Conde, S. Chakraborty, K. M. Balmant, T. B. Irving, L. Gontijo Silva Maia, P. M. Triozzi, C. Dervinis, W. J. Pereira, J. Maeda, H. W. Schmidt, J.-M. Ane, M. Kirst, S. Roy

The paper identifies regulators of legume-rhizobia symbiosis by analyzing temporal chromatin accessibility and gene expression in Medicago truncatula roots.

bioRxiv · Aug 7, 2021Plant Biology

Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen-fixing clade

W. J. Pereira, S. A. Knaack, D. Conde, S. Chakraborty, R. A. Folk, P. M. Triozzi, K. M. Balmant, C. Dervinis, H. W. Schmidt, J.-M. Ane, S. Roy, M. Kirst

The paper identifies conserved noncoding sequences in nitrogen-fixing plants and shows their role in regulating genes involved in root nodule symbiosis.

bioRxiv · Jul 27, 2021Plant Biology

Spatiotemporal cytokinin signaling imaging reveals IPT3 function in nodule development in Medicago truncatula

P. Triozzi, T. B. Irving, H. W. Schmidt, Z. P. Keyser, S. Chakraborty, K. M. Balmant, W. J. Pereira, C. Dervinis, K. S. Mysore, J. Wen, J.-M. Ane, M. Kirst, D. Conde Rodriguez

bioRxiv · Apr 23, 2021Plant Biology