Author
R. P. Guralnick
Primary ORCID profile (0000-0001-6682-1504 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints
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Biology Disciplines
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2017-2023 · peak 7/yrCo-Author Collaboration Network
10 top collaborators · 34 mutual co-author links18 papers
Recent·Most cited
- Evolutionary BiologybioRxivPreprintDOI 10.1101/2023.08.26.554607
- Plant BiologybioRxivPreprint
Anatomy of a mega-radiation: Biogeography and niche evolution in Astragalus
R. A. Folk, J. Charboneau, m. belitz…·C. M. Siniscalchi
This study investigates the biogeography and niche evolution of Astragalus, finding that chromosome number correlates with diversification, central Asia as the origin, and soil and temperature divergence between hemispheres.
DOI 10.1101/2023.06.27.546767 - Plant BiologybioRxiv
FloraTraiter: Automated parsing of traits from descriptive biodiversity literature
R. A. Folk, R. P. Guralnick, R. T. LaFrance
FloraTraiter automates extraction of plant trait data from biodiversity literature with high accuracy, enabling large-scale open-source trait dataset creation.
DOI 10.1002/aps3.11563 - Evolutionary BiologybioRxivPreprint
Phylogenomic Analyses Reveal Widespread Gene Flow During the Early Radiation of Oaks and Relatives (Fagaceae: Quercoideae)
S. Liu, Y. Yang, Q. Tian…·T. Yi
This study uses phylogenomic data to show widespread gene flow and reticulation during the early radiation of oaks and related genera.
DOI 10.1101/2023.04.25.538215 - Evolutionary BiologybioRxivPreprint
Spatial phylogenetics of Fagales: Investigating the history of temperate forests
R. A. Folk, C. M. Siniscalchi, J. Doby…·M. Belitz
This study quantifies phylogenetic diversity and distribution patterns of Fagales to understand drivers of temperate forest biomes.
DOI 10.1101/2023.04.17.537249 - Plant BiologybioRxivPreprint
Fagalean phylogeny in a nutshell: Chronicling the diversification history of Fagales
C. M. Siniscalchi, J. Correa-Narvaez, H. R. Kates…·R. A. Folk
This study reconstructs the diversification history of Fagales using a fossil-aware phylogenetic approach, finding older divergence times and highlighting the impact of fossil inclusion on biogeographic and diversification estimates.
DOI 10.1101/2023.03.06.531381 - EcologybioRxiv
A phylogeny-informed characterisation of global tetrapod traits addresses data gaps and biases
M. R. Moura, K. Ceron, J. J. M. Guedes…·W. Jetz
The paper creates a comprehensive tetrapod trait database using phylogeny-informed imputation, revealing data gaps and biases in trait distribution across species.
DOI 10.1371/journal.pbio.3002658 - Plant BiologybioRxivPreprint
Testing the evolutionary drivers of nitrogen-fixing symbioses in challenging soil environments
C. M. Siniscalchi, H. R. Kates, P. R. Soltis…·R. A. Folk
The paper tests environmental determinants of nitrogen-fixing symbioses using phylogenetic analysis and finds RNS is linked to warm, arid, and nitrogen-poor habitats but not directly responsible for diversification.
DOI 10.1101/2022.09.27.509719 - Evolutionary BiologybioRxivPreprint
Identifying climatic drivers of hybridization in Heuchereae (Saxifragaceae)
R. A. Folk, M. L. Gaynor, N. J. Engle-Wrye…·Y. Okuyama
This study identifies climatic factors driving hybridization in Heuchereae by analyzing phylogenetic data and paleoclimatic records.
DOI 10.1101/2022.08.24.505154 - Evolutionary BiologybioRxivPreprint
Two shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants
H. Kates, B. C. O'Meara, R. LaFrance…·R. A. Folk
The paper reconstructs the evolutionary history of root-nodule symbiosis in the nitrogen-fixing clade, identifying a two-step process involving shifts in evolutionary lability that explain multiple independent gains and losses of the trait.
DOI 10.1101/2022.07.31.502231 - EcologybioRxiv
Spatial phylogenetics of butterflies in relation to environmental drivers and angiosperm diversity across North America
C. Earl, M. W. Belitz, S. W. Laffan…·R. P. Guralnick
This study compares spatial phylogenetic patterns of butterflies and flowering plants in North America, finding divergent biodiversity patterns and suggesting differences in habitat conservation.
DOI 10.1016/j.isci.2021.102239 - Evolutionary BiologybioRxiv
Degradation of key photosynthetic genes in the critically endangered semi-aquatic flowering plant Saniculiphyllum guangxiense (Saxifragaceae)
R. A. Folk, N. Sewnath, C. Xiang…·R. P. Guralnick
The paper reports the plastid genome of Saniculiphyllum guangxiense, revealing extensive pseudogenization of photosynthesis-related genes despite its fully photosynthetic lifestyle.
DOI 10.1186/s12870-020-02533-x - EcologybioRxivPreprint
Opportunistically collected photographs can be used to estimate large-scale phenological trends
The paper estimates large-scale phenological trends using iNaturalist photographs and compares them with Phenocam data, showing alignment across years and latitudes.
DOI 10.1101/794396 - EcologybioRxiv
Methods for broad-scale plant phenology assessments using citizen scientists’ photographs
V. Barve, L. Brenskelle, D. Li…·R. P. Guralnick
The paper develops best practices for using iNaturalist citizen science data to assess plant flowering phenology, demonstrating its utility for studying unusual flowering events and integrating data into a global knowledge store.
DOI 10.1002/aps3.11315 - Evolutionary BiologybioRxiv
Estimating rates and patterns of diversification with incomplete sampling: A case study in the rosids
M. Sun, R. Folk, M. A. Gitzendanner…·D. E. Soltis
This study examines how incomplete sampling affects diversification rate estimates in rosids and finds that no method is fully robust to poor sampling, with BAMM being least sensitive to moderate missing taxa.
DOI 10.1002/ajb2.1479 - Evolutionary BiologybioRxivPreprint
Exploring the phylogeny of rosids with a five-locus supermatrix from GenBank
M. Sun, R. A. Folk, M. A. Gitzendanner…·Z. Chen
The paper constructs a five-locus supermatrix from GenBank data to explore rosid phylogeny, finding improved resolution but also highlighting sampling biases and limitations in current data.
DOI 10.1101/694950 - EcologybioRxiv
For common community phylogenetic analyses, go ahead and use synthesis phylogenies
D. Li, L. Trotta, H. E. Marx…·B. H. Baiser
This paper compares purpose-built and synthesis phylogenies for community phylogenetic analyses, finding synthesis trees yield comparable results with less effort.
DOI 10.1002/ecy.2788 - Evolutionary BiologybioRxiv
Geographic range dynamics drove ancient hybridization in a lineage of angiosperms
R. A. Folk, C. J. Visger, P. S. Soltis…·R. P. Guralnick
The paper develops novel methods to reconstruct ancient hybridization in Heuchera by integrating dispersal-based biogeography and habitat suitability shifts.
DOI 10.1086/698120