Author

R. Basom

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

J. Delrow· 2 shared J. Overbaugh· 2 shared L. Carter· 2 shared P. Corrin· 2 shared P. Paddison· 2 shared S. Arora· 2 shared A. Hsieh· 1 shared A. Lim· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCell Biology

J. Delrow

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Phage-DMS: a comprehensive method for fine mapping of antibody epitopes

M. E. Garrett, H. L. Itell, K. H. D. Crawford, R. Basom, J. D. Bloom, J. Overbaugh

Phage-DMS combines immunoprecipitation of phage peptide libraries with deep mutational scanning to fine map antibody epitopes, refining known epitopes for HIV monoclonal antibodies.

bioRxiv · May 11, 2020Immunology

Neural G0: a quiescent-like state found in neuroepithelial-derived cells and glioma

H. Feldman, C. Toledo, S. Arora, P. Hoellerbauer, P. Corrin, L. Carter, M. Kufeld, H. Bolouri, R. Basom, J. Delrow, J. McFaline-Figueroa, C. Trapnell, S. Pollard, A. Patel, C. Plaisier, P. Paddison

The paper identifies a quiescent-like state, Neural G0, in human neural stem cells and gliomas using scRNA-seq, linking it to tumor aggressiveness and survival.

bioRxiv · Feb 16, 2020 · PreprintCell Biology

N6-methyladenosine mRNA marking promotes selective translation of regulons required for human erythropoiesis

D. Kuppers, S. Arora, Y. Lim, A. Lim, L. Carter, P. Corrin, C. Plasier, R. Basom, J. Delrow, S. Wang, H. He, B. Torok-Storb, A. Hsieh, P. Paddison

The paper identifies m6A mRNA methylation as a regulator of erythropoiesis by promoting the translation of key genes involved in erythroid lineage specification.

bioRxiv · Oct 31, 2018Cell Biology

A Virus-Packageable CRISPR Screen Identifies Host Factors Mediating Interferon Inhibition of HIV

M. Ohainle, L. Pendergast, J. Vermeire, F. Roesch, D. Humes, R. Basom, J. J. Delrow, J. Overbaugh, M. Emerman

The paper uses a CRISPR screen to identify host factors that mediate interferon inhibition of HIV replication, finding several restriction factors and novel dependencies.

bioRxiv · Jul 20, 2018Microbiology