Author

S. Carlson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Cell Biology· 1 Ecology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Organism:human· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

C. M. Evans· 2 shared G. Cornilescu· 2 shared J. C. Gay· 2 shared J. L. Markley· 2 shared K. C. Glass· 2 shared M. Phillips· 2 shared M. Tonelli· 2 shared A. Borensztejn· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBiochemistry

C. M. Evans

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Author profile →

5 papers

Recent·Most cited

Genetic code expansion, click chemistry, and light-activated PI3K reveal details of membrane protein trafficking downstream of receptor tyrosine kinases

D.-S. Koh, A. Stratiievska, S. Jana, S. C. Otto, T. M. Swanson, A. Nhim, S. Carlson, M. Raza, L. A. Naves, E. N. Senning, R. A. Mehl, S. E. Gordon

The paper uses optogenetic PI3K activation and genetic code expansion to study RTK signaling, showing PI3K alone can traffic TRPV1 and insulin receptors to the plasma membrane.

eLife · Aug 20, 2024Peer-reviewedPhysiology

Elevated Expression of srp RiPPs Across Bacterial Phyla in Marine Sponges

S. C. Waterworth, E. R. Rees, C. Clark, S. Carlson, I. J. Miller, M. Puglisi, J. C. Kwan

The paper examines transcriptional activity of bacterial communities in marine sponges, finding that less abundant bacterial bins are more transcriptionally active and that srp RiPPs are highly expressed across diverse phyla.

bioRxiv · Jun 9, 2023 · PreprintEcology

Coordination of di-acetylated histone ligands by the ATAD2 bromodomain

C. M. Evans, M. Phillips, K. L. Malone, M. Tonelli, G. Cornilescu, C. Cornilescu, S. Holton, M. Gorjanacz, L. Wang, S. Carlson, J. C. Gay, J. C. Nix, B. Demeler, J. L. Markley, K. C. Glass

This study identifies how the ATAD2 bromodomain recognizes di-acetylated histone tails through residue-specific interactions and confirms its monomeric state using biophysical techniques.

bioRxiv · Jul 23, 2021Biochemistry

Robust integrated intracellular organization of the human iPS cell: where, how much, and how variable

M. P. Viana, J. Chen, T. A. Knijnenburg, R. Vasan, C. Yan, J. E. Arakaki, M. Bailey, B. Berry, A. Borensztejn, J. M. Brown, S. Carlson, J. A. Cass, B. Chaudhuri, K. R. Cordes Metzler, M. E. Coston, , Leung

The paper establishes quantitative rules for the locations, amounts, and variation of 25 cellular structures in human iPSCs using high-resolution imaging and analysis.

bioRxiv · Dec 8, 2020 · PreprintCell Biology

Structural insights into the recognition of mono- and di-acetylated histones by the ATAD2B bromodomain

J. T. Lloyd, K. McLaughlin, M. Y. Lubula, J. C. Gay, A. Dest, C. Gao, M. Phillips, M. Tonelli, G. Cornilescu, M. R. Marunde, C. M. Evans, S. P. Boyson, S. Carlson, M.-C. Keogh, J. L. Markley, , K. C. Glass

This study investigates the ligand specificity of the ATAD2B bromodomain, showing it binds mono- and di-acetylated histones and identifies structural features critical for this recognition.

bioRxiv · May 12, 2020 · PreprintBiochemistry