Author

T. Peto

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Approach:statistical model· 3 Research Focus:variant calling· 3 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

D. Crook· 3 shared G. Smith· 3 shared E. Robinson· 2 shared S. I. W. Lipworth· 2 shared T. Walker· 2 shared A. Giess· 1 shared A. Sheppard· 1 shared A. Walker· 1 shared

Activity by Year

2017-2018 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersMicrobiology

D. Crook

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Whole genome sequencing for predicting clarithromycin resistance in Mycobacterium abscessus

S. I. W. Lipworth, N. Hough, L. Leach, M. Morgan, K. Jeffrey, M. Andersson, E. Robinson, G. Smith, D. Crook, T. Peto, T. Walker

This study uses whole genome sequencing to predict clarithromycin resistance in Mycobacterium abscessus by identifying known and novel resistance-determining mutations.

bioRxiv · Sep 28, 2018Microbiology

A quantitative evaluation of MIRU-VNTR typing against whole-genome sequencing for identifying Mycobacterium tuberculosis transmission: A prospective observational cohort study

D. Wyllie, J. Davidson, T. Walker, P. Rathod, T. Peto, E. Robinson, D. W. Crook, G. Smith, C. Campbell

This study evaluates MIRU-VNTR typing against whole-genome sequencing to identify Mycobacterium tuberculosis transmission, finding low predictive value of MIRU-VNTR and lineage-specific performance.

bioRxiv · Jan 24, 2018Microbiology

A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the Mycobacterium tuberculosis complex by whole genome sequencing

S. I. W. Lipworth, R. Jajou, H. de Neeling, P. Bradley, W. van der Hoek, G. Maphalala, M. Bonnet, E. Sanchez-Padilla, R. Diel, S. Niemann, Z. Iqbal, G. Smith, T. Peto, D. Crook, T. M. Walker, D. van Soolingen

This paper introduces SNP-IT, a method using whole genome sequencing to identify subspecies and lineages of Mycobacterium tuberculosis complex, revealing high prevalence of M. orygis in UK clinical isolates.

bioRxiv · Jan 5, 2018Microbiology

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia

J. van Aartsen, C. Moore, C. Parry, P. Turner, N. Phot, S. Mao, K. Suy, T. Davies, A. Giess, A. Sheppard, T. Peto, N. Day, D. Crook, A. Walker, N. Stoesser

The paper investigates ESC-R-EC and ESC-R-KP colonization in Cambodian children, identifies risk factors, and characterizes resistance gene diversity and genetic contexts.

bioRxiv · Aug 16, 2017Microbiology