Author

T. Tabib

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 2 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 4 Research Focus:cell type annotation· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:clustering· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

R. Lafyatis· 3 shared A. C. Gay· 1 shared A. Collin· 1 shared A. J. Gutierrez· 1 shared A. Kulkarni· 1 shared A. Liu· 1 shared A. Papazoglou· 1 shared A. R. Cillo· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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3 shared papersCancer Biology

R. Lafyatis

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

An integrated cell atlas of the human lung in health and disease

L. Sikkema, D. C. Strobl, L. Zappia, E. Madissoon, N. S. Markov, L.-E. Zaragosi, M. Ansari, M.-J. Arguel, L. Apperloo, C. Becavin, M. Berg, E. Chichelnitskiy, M.-i. Chung, A. Collin, A. C. Gay, , K. Travaglini

The paper integrates 46 single-cell datasets to create the Human Lung Cell Atlas, improving cell annotation and uncovering gene modules linked to demographics and anatomy.

bioRxiv · Mar 10, 2022Cell Biology

An individualized causal framework for learning intercellular communicationnetworks that define microenvironments of individual tumors

X. Chen, L. Chen, C. H. L. Kurten, F. Jabbari, L. Vujanovic, Y. Ding, B. Lu, K. Lu, A. Kulkarni, T. Tabib, R. Lafyatis, G. F. Cooper, R. Ferris, X. Lu

The paper develops a causal framework to identify tumor-specific intercellular communication networks in head and neck squamous cell carcinoma, revealing subtype-specific patterns linked to clinical outcomes.

bioRxiv · Nov 11, 2021Cancer Biology

Myofibroblast transcriptome indicates SFRP2+ fibroblast progenitors in systemic sclerosis skin

T. Tabib, M. A. Huang, C. Morse, A. Papazoglou, R. Behera, M. Jia, M. Bulik, D. E. Monier, P. V. Benos, W. Chen, R. Domsic, R. Lafyatis

The paper identifies SFRP2+ fibroblast progenitors as the source of myofibroblasts in systemic sclerosis skin using single-cell RNA sequencing.

bioRxiv · Apr 30, 2021Cell Biology

Divergent cancer etiologies drive distinct B cell signatures and tertiary lymphoid structures

A. T. Ruffin, A. R. Cillo, T. Tabib, A. Liu, S. Onkar, S. Kunning, C. Lampenfeld, I. Abecassis, Z. Qi, R. Soose, U. D. Duvvuri, S. Kim, S. Oesterreich, R. Lafyatis, R. L. Ferris, , T. C. Bruno

This study identifies distinct B cell signatures and tertiary lymphoid structures in HPV+ and HPV- HNSCC, highlighting their role in antitumor immunity.

bioRxiv · May 29, 2020 · PreprintImmunology