Author

C. Black

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 4 Microbiology· 2 Biochemistry· 1 Bioengineering· 1 Biophysics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 8 Research Focus:protein structure prediction· 4 Research Focus:cell type annotation· 3 Assay:cryo-EM· 3 Organism:bacteria (other)· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

K. H. Bui· 6 shared M. Ichikawa· 3 shared A. A. Z. Khalifa· 2 shared C. A. Wakeman· 2 shared D. Dai· 2 shared H. al Mahmud· 2 shared J. Gaertig· 2 shared J.-F. Trempe· 2 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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6 shared papersCell Biology

K. H. Bui

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Global stress response in Pseudomonas aeruginosa upon malonate utilization

K. Bisht, M. M. Elmassry, H. al Mahmud, S. Bhattacharjee, A. Deonarine, C. Black, M. San Francisco, A. N. Hamood, C. A. Wakeman

This study investigates how Pseudomonas aeruginosa adapts to malonate as a sole carbon source, revealing global gene expression changes and phenotypic responses.

bioRxiv · Mar 26, 2024 · PreprintMicrobiology

Comparing physiological impacts of positive pressure ventilation versus self-breathing via a versatile cardiopulmonary model incorporating a novel alveoli opening mechanism

M. T. Cabeleira, V. A. Dharmalingam, C. Black, S. Ray, N. Ovenden, V. Diaz

bioRxiv · Mar 12, 2024Physiology

Heterogeneity of radial spokes structural components and associated enzymes in Tetrahymena cilia

M. Bicka, A. Ghanaeian, C. Black, E. Joachimiak, A. Osinka, S. Majhi, A. Konopka, E. Bulska, K. H. Bui, D. Wloga

The paper identifies subtype variations in radial spokes of Tetrahymena cilia, revealing Rsp3 paralogs-dependent structures and novel associated enzymes involved in ADP/ATP regulation and phosphorylation.

bioRxiv · Aug 11, 2023 · PreprintCell Biology

Molecular architecture of the ciliary tip revealed by cryo-electron tomography

T. Legal, M. Tong, C. Black, M. Valente-Paterno, J. Gaertig, K. H. Bui

The paper uses cryo-electron tomography to reveal the molecular architecture of the ciliary tip in Tetrahymena thermophila, showing cross-linked microtubules and structural features of the central pair.

bioRxiv · Jan 3, 2023Cell Biology

Development of a polymicrobial checkerboard assay as a tool for determining combinatorial antibiotic effectiveness in polymicrobial communities

C. Black, H. Al Mahmud, S. Wilson, A. C. Smith, C. A. Wakeman

This paper develops a polymicrobial checkerboard assay to assess combinatorial antibiotic effectiveness in mixed bacterial communities, finding that visible turbidity is not reliable and polymicrobial interactions can reduce antibiotic efficacy.

bioRxiv · Oct 12, 2022Microbiology

Cryo-EM structure of the Agrobacterium tumefaciens T-pilus reveals the importance of positive charges in the lumen

J. Amro, C. Black, Z. Jemouai, N. Rooney, C. Daneault, N. Zeytuni, M. Ruiz, K. H. Bui, C. Baron

The paper reports cryo-EM structures of Agrobacterium tumefaciens T-pilus and related N-pilus, showing positive charges in the lumen are functionally important.

bioRxiv · Apr 28, 2022Biochemistry

Nonlinear micro finite element models based on digital volume correlation measurements predict early microdamage in newly formed bone

M. Pena Fernandez, S. J. Sasso, S. McPhee, C. Black, J. Kanczler, G. Tozzi, U. Wolfram

bioRxiv · Feb 26, 2022Bioengineering

Remodeling and activation mechanisms of outer arm dyneins revealed by cryo-electron microscopy

S. Kubo, S. K. Yang, C. Black, D. Dai, M. Valente, J. Gaertig, M. Ichikawa, K. H. Bui

This study uses cryo-electron microscopy to reveal the structure of outer dynein arms attached to microtubules and proposes a model for their remodeling and activation through molecular dynamics simulations.

bioRxiv · Nov 30, 2020Cell Biology

The inner junction complex of the cilia is an interaction hub that involves tubulin post-translational modifications

A. A. Z. Khalifa, M. Ichikawa, D. Dai, C. Black, K. Peri, T. S. McAlear, S. Kubo, S. Veyron, S. K. Yang, J. Vargas, J.-F. Trempe, S. Bechstedt, K. H. Bui

The paper identifies new inner junction proteins in cilia and shows they form an interaction hub involving tubulin post-translational modifications.

bioRxiv · Oct 10, 2019Biophysics

Crystal structure of human PACRG in complex with MEIG1

N. Khan, D. Pelletier, S. Veyron, N. Croteau, M. Ichikawa, C. Black, A. A. Z. Khalifa, S. Chaaban, I. Kurinov, G. Brouhard, K. H. Bui, J.-F. Trempe

The paper reports the crystal structure of human PACRG with MEIG1 and models its role in microtubule junctions, revealing interactions with tubulin and evolutionary insights.

bioRxiv · Sep 27, 2019Cell Biology