Author

C. Gray

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Ecology· 2 Immunology· 2 Physiology· 2 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 6 Research Focus:cell type annotation· 5 Approach:experimental assay· 5 Organism:human· 4 Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Research Focus:ecology & biodiversity· 2 Assay:metagenomics· 2

Frequent Co-Authors

H. B. Jaspan· 3 shared B. Armistead· 2 shared C. Balle· 2 shared C. D. P. Duffy· 2 shared W. E. Harrington· 2 shared A. A. S. Tavares· 1 shared A. Armstrong· 1 shared A. Ashkenazy-Titelman· 1 shared

Activity by Year

2019-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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3 shared papersImmunology

H. B. Jaspan

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Predicting the diversity of photosynthetic light-harvesting using thermodynamics and machine learning

C. Gray, S. Chitnavis, T. L. Buja, C. D. P. Duffy

The paper predicts photosynthetic light-harvesting diversity using thermodynamics and machine learning, showing similar principles apply across light environments and suggesting potential for extraterrestrial photosynthesis.

bioRxiv · Jun 19, 2024Biophysics

DERIVATION OF ELEPHANT INDUCED PLURIPOTENT STEM CELLS

E. M. Appleton, K. Hong, C. Rodriguez-Caycedo, Y. Tanaka, A. Ashkenazy-Titelman, K. Bhide, C. Rasmussen-Ivey, X. Ambriz-Pena, N. Korover, H. Bai, A. Quieroz, J. Nelson, G. Rathod, G. Knox, M. Morgan, , E. Hysolli

This paper reports the first derivation of elephant induced pluripotent stem cells (emiPSCs) using a modified reprogramming protocol that inhibits TP53 expansion genes.

bioRxiv · Mar 5, 2024Cell Biology

Exposure to HIV alters the composition of maternal microchimeric T cells in infants

B. Armistead, Q. Peters, J. Houck, M. Carlson, C. Balle, N. Mulugeta, C. Gray, H. B. Jaspan, W. E. Harrington

The paper examines how HIV exposure in infants affects maternal microchimeric T cells, finding reduced levels in CD8+ T cells among HIV-exposed uninfected infants.

bioRxiv · Mar 1, 2024 · PreprintImmunology

Quantifying the IUCN Red List: Using historical assessments to calculate future extinction risk

R. Bates, E. Taylor, Y. Sun, R. Gumbs, M. Böhm, C. Gray, J. Rosindell

This paper calculates continuous extinction risk from historical IUCN Red List data, revealing that species attributes like taxonomy, body size, and habitat specialism influence risk beyond the current categorical assessments.

bioRxiv · Feb 4, 2024 · PreprintEcology

Recovering birds and mammals across Europe continue to be negatively impacted by threats but benefit from conservation measures

C. Gray, L. McRae, S. Deinet, S. E. H. Ledger, C. Benham, I. Burfield, M. Eaton, K. Scott-Gatty, H. Puleston, C. Rutherford, A. Staneva, F. Schepers, R. Freeman

The paper examines recovery trends of 47 European bird and mammal species, finding that greater threat diversity reduces recovery likelihood but conservation measures can mitigate this effect.

bioRxiv · Sep 1, 2022 · PreprintEcology

Trivial Excitation Energy Transfer to Carotenoids is an Unlikely Mechanism for Non-Photochemical Quenching in LHCII

C. Gray, T. Wei, T. Polivka, V. Daskalakis, C. D. P. Duffy

This study challenges the idea that trivial energy transfer to carotenoid S1 states is the main mechanism of NPQ in LHCII, showing it is unlikely due to insufficient pigment movement and overestimated S1 oscillator strength.

bioRxiv · Oct 18, 2021 · PreprintBiophysics

Factors influencing maternal microchimerism throughout infancy and its impact on infant T cell immunity

C. Balle, B. Armistead, A. Kiravu, X. Song, A.-U. Happel, A. Hoffmann, S. B. Kanaan, J. L. Nelson, C. Gray, H. B. Jaspan, W. E. Harrington

The paper examines factors affecting maternal microchimerism (MMc) in infants and its impact on T cell immunity following BCG vaccination.

bioRxiv · Mar 2, 2021Immunology

A novel female-specific circadian clock mechanism regulating metabolism

T. Mekbib, T.-C. Suen, A. Rollins-Hairston, K. Smith, A. Armstrong, C. Gray, K. Baba, J. Baggs, J. C. Ehlen, G. Tosini, J. DeBruyne

This study identifies a female-specific circadian clock mechanism involving Siah2 that regulates metabolic rhythms and gene expression in the liver.

bioRxiv · Oct 5, 2020 · PreprintPhysiology

Bone marrow adipose tissue is a unique adipose subtype with distinct roles in systemic glucose homeostasis

K. J. Suchacki, A. A. S. Tavares, D. Mattiucci, E. L. Scheller, G. Papanastasiou, C. Gray, M. C. Sinton, L. E. Ramage, W. A. McDougald, A. Lovdel, R. J. Sulston, B. J. Thomas, B. M. Nicholson, A. J. Drake, C. Alcaide-Corral, , W. P. Cawthorn

This study identifies bone marrow adipose tissue (BMAT) as a distinct adipose subtype with unique metabolic functions in glucose homeostasis.

bioRxiv · Jun 18, 2019Physiology

crAssphage abundance and genomic selective pressure correlate with altered bacterial abundance in the fecal microbiota of South African mother-infant dyads

B. P. Brown, J. Wendoh, D. Chopera, E. Havyarimana, S. Z. Jaumdally, D. D. Nyangahu, C. Gray, D. P. Martin, A. Varsani, H. B. Jaspan

The paper investigates crAssphage transmission and genomic evolution in South African mother-infant dyads, finding evidence of vertical transmission and positive selection in phage genes correlated with bacterial abundance.

bioRxiv · Mar 19, 2019 · PreprintMicrobiology