Author

K. Neumann

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Immunology· 2 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Assay:whole-genome sequencing· 3 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:database / resource· 2 Research Focus:development & morphogenesis· 2 Research Focus:differential expression· 2

Frequent Co-Authors

A. Graner· 2 shared B. Kilian· 2 shared K. J. Metzner· 2 shared A. A. Filatenko· 1 shared A. Al-Yassin· 1 shared A. Benazzo· 1 shared A. Bogaard· 1 shared A. Calmy· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersEvolutionary Biology

A. Graner

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Adaptive gene loss in the common bean pan-genome during range expansion and domestication

G. Cortinovis, L. Vincenzi, R. Anderson, G. Marturano, J. I. Marsh, P. E. Bayer, L. Rocchetti, G. Frascarelli, G. Lanzavecchia, A. Pieri, A. Benazzo, E. Bellucci, V. Di Vittori, L. Nanni, J. J. F. Fernandez, , R. Papa

This study identifies adaptive gene loss in common bean populations during range expansion and domestication, showing gene loss as a key adaptive trait.

bioRxiv · Nov 23, 2023Evolutionary Biology

Mycobacterium tuberculosis infection associated immune perturbations correlate with antiretroviral immunity

B. Tepekule Mueller, L. Joerimann, C. D. Schenkel, L. Opitz, J. Tschumi, R. Wolfensberger, K. Neumann, K. Kusejko, M. Zeeb, L. Boeck, M. Kaelin, J. Notter, H. Furrer, M. Hoffmann, H. H. Hirsch, , the Swiss HIV Cohort Study

The paper shows MTB infection in HIV-positive individuals correlates with immune system shifts and reduced HIV-1 viral load.

bioRxiv · Jul 14, 2023Immunology

Transcriptional and clonal characterization of cytotoxic CD8+ T cells in crescentic glomerulonephritis

Y. Zhao, A. Mueller, H. Cicek, H.-J. Paust, A. Sivayoganathan, A. Linke, C. Wegscheid, T. Wiech, T. B. Huber, C. Meyer-Schwesinger, S. Bonn, U. P. Panzer, G. Tiegs, C. F. Krebs, K. Neumann

This study identifies clonally expanded cytotoxic CD8+ T cells in ANCA-associated cGN and shows their pathogenic role in kidney disease progression.

bioRxiv · Aug 31, 2022Immunology

Genetic diversity, distribution and domestication history of the neglected GGAtAt genepool of wheat

E. D. Badaeva, F. A. Konovalov, H. Knuepffer, A. Fricano, A. S. Ruban, Z. Kehel, S. A. Zoshchuk, S. A. Surzhikov, K. Neumann, A. Graner, K. Hammer, A. A. Filatenko, A. Bogaard, G. Jones, H. Ozkan, B. Kilian

This study surveys the genomic and cytogenetic diversity of the neglected GGAtAt wheat genepool, revealing three distinct lineages and chromosomal rearrangements contributing to intraspecific diversity.

bioRxiv · Jan 10, 2021Evolutionary Biology

HIV-1 promoter is gradually silenced when integrated into BACH2

A. Inderbitzin, Y. L. Kok, L. Jörimann, A. Kelley, K. Neumann, D. Heinzer, T. Cathomen, K. J. Metzner

This study shows that HIV-1 promoters integrated into BACH2 are gradually silenced over time in Jurkat T-cells, without affecting BACH2 expression, potentially contributing to HIV-1 persistence.

PeerJ · Nov 24, 2020Peer-reviewedMicrobiology

On the origin of photoperiod non-responsiveness in barley

R. Sharma, S. Shaaf, K. Neumann, Y. Guo, M. Mascher, M. David, A. Al-Yassin, H. Özkan, T. Blake, S. Hübner, N. P. Castaneda-Alvarez, S. Grando, S. Ceccarelli, M. Baum, A. Graner, , B. Kilian

This study identifies the origin of photoperiod non-responsiveness in barley by analyzing genetic variation and haplotype relationships in wild and domesticated barleys.

bioRxiv · Jul 2, 2020 · PreprintPlant Biology