Author

R. Pi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Gilardet· 1 shared A. J. Rogers· 1 shared A. J. Wilk· 1 shared A. L. Blomkalns· 1 shared B. Parks· 1 shared B. Wei· 1 shared C. A. Blish· 1 shared C. Bei· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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Curved chords = mutual co-authorship

1 shared paperMicrobiology

A. Gilardet

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3 papers

Recent·Most cited

Drug degradation caused by mce3R mutations confers contezolid (MRX-I) resistance in Mycobacterium tuberculosis

Q. Gao, R. Pi, X. Chen, J. Meng, Q. Liu, Y. Chen, C. Bei, C. Wang

This study identifies mce3R mutations causing contezolid resistance in Mycobacterium tuberculosis by increasing Rv1936-mediated drug degradation.

bioRxiv · Jul 25, 2022Microbiology

Multi-omic profiling reveals widespread dysregulation of innate immunity and hematopoiesis in COVID-19

A. J. Wilk, M. J. Lee, B. Wei, B. Parks, R. Pi, G. J. Martinez-Colon, T. Ranganath, N. Q. Zhao, S. Taylor, W. Becker, Stanford COVID-19 Biobank, D. Jimenez-Morales, A. L. Blomkalns, R. O'Hara, E. A. Ashley, , C. A. Blish

Single-cell multi-omic profiling identifies immune dysregulation in severe COVID-19, including neutrophil hyperactivation and anti-inflammatory monocytes.

bioRxiv · Dec 18, 2020Immunology

In vivo imaging of retrovirus infection reveals a role for Siglec-1/CD169 in multiple routes of transmission

K. A. Haugh, M. S. Ladinsky, I. Ullah, R. Pi, A. Gilardet, P. Kumar, P. Bjorkman, W. Mothes, P. D. Uchil

This study uses in vivo imaging to show that Siglec-1/CD169 on sentinel macrophages facilitates retrovirus transmission through multiple routes.

bioRxiv · Oct 20, 2020Microbiology