Author

S. Apte

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Biochemistry· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Assay:proteomics· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Organism:bacteria (other)· 1 Approach:deep learning· 1

Frequent Co-Authors

A. Banerjee· 1 shared A. Datey· 1 shared A. R. Sinha· 1 shared A. Ramamurthi· 1 shared B. Bessette· 1 shared B. Ramkhelawon· 1 shared B. Willard· 1 shared C. Bajaj· 1 shared

Activity by Year

2018-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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1 shared paperMicrobiology

A. Banerjee

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Integrated forward and reverse degradomics uncovers the proteolytic landscape of aortic aneurysms and the roles of MMP9 and mast cell chymase

D. S. Martin, S. Bhutada, F. S. Cikach, E. G. Neto, B. Willard, B. Ramkhelawon, M. K. Chung, S. Dahal, A. Ramamurthi, J. P. Joshi, D. Blankenburg, J. Barnard, E. H. Blackstone, E. E. Roselli, S. Apte

The paper uses forward and reverse degradomics to analyze proteolytic landscapes in aortic aneurysms, identifying key proteases like MMP9 and CMA1 and their roles in extracellular matrix remodeling.

Arteriosclerosis, Thrombosis, and Vascular Biology · May 1, 2026Peer-reviewedBiochemistry

A novel innate pathogen sensing strategy involving ubiquitination of bacterial surface proteins

S. Apte, S. Bhutda, S. Ghosh, K. Sharma, O. Sahay, J. Rakshit, A. R. Sinha, S. Dibyachintan, S. Roy, A. Datey, S. Santra, J. Joseph, S. Sasidharan, S. Hammerschmidt, D. Chakravortty, , A. Banerjee

The paper identifies a novel innate pathogen sensing strategy through ubiquitination of bacterial surface proteins, revealing a conserved mechanism for pathogen detection and clearance.

bioRxiv · Oct 20, 2021 · PreprintMicrobiology

Acidity and sulfur oxidation intermediate concentrations controlled by O2-driven partitioning of sulfur oxidizing bacteria in a mine tailings impoundment

K. J. Whaley-Martin, L.-X. Chen, T. Colebrander Nelson, J. Gordon, R. Kantor, L. E. Twible, S. Marshall, L. Rossi, B. Bessette, C. Baron, S. Apte, J. Banfield, L. A. Warren

The paper investigates sulfur oxidation by bacteria in a mine tailings impoundment, showing how oxygen drives niche partitioning among sulfur-oxidizing bacteria and affects acidity and thiosulfate levels.

bioRxiv · Sep 16, 2021 · PreprintMicrobiology

Cryo-Electron tomography 3D structure and nanoscale model of Arabidopsis thaliana cell wall

P. Sarkar, M. Kowalczyk, S. Apte, E. G. Yap, J. Das, P. D. Adams, C. Bajaj, P. Guindos, M. Auer

Cryo-electron tomography and mechanical simulations revealed cell wall 3D architecture, optimized for flexibility/ductility.

bioRxiv · Dec 10, 2018 · PreprintPlant Biology