Author

D. Deb

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Plant Biology· 2 Biochemistry· 1 Biophysics· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:cell type annotation· 3 Research Focus:host-pathogen & immune response· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:differential expression· 2 Assay:imaging· 2 Assay:proteomics· 2

Frequent Co-Authors

A. Aloma· 1 shared A. B. Paaby· 1 shared A. D. Bell· 1 shared A. F. Gazdar· 1 shared A. K. Mukherjee· 1 shared A. M. Weeks· 1 shared A. Sagar· 1 shared B. Drapkin· 1 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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1 shared paperCancer Biology

A. Aloma

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8 papers

Recent·Most cited

Engineered reactivity of a bacterial E1-like enzyme enables ATP-driven modification of protein C termini

C. L. Frazier, D. Deb, A. M. Weeks

The paper develops an ATP-driven platform for C-terminal protein modification using a bacterial E1-like enzyme, enabling precise bioconjugation with diverse functional groups.

bioRxiv · May 13, 2024 · PreprintBiochemistry

The Effect of Sunlight Intensity on Flower Opening Time and Exposure Duration in Rice (Oryza sativa ssp. indica) Landraces

D. Deb, S. Dutta, M. Nauri

This study examines how sunlight intensity affects flower opening time and duration in rice landraces, finding that cloudy conditions delay flowering and prolong the sunrise-to-anthesis duration.

bioRxiv · Sep 10, 2023Plant Biology

A single dietary factor, daily consumption of a fermented beverage, can modulate the gut microbiome within the same ethnic community

S. Das, E. Ozkurt, T. K. Joishy, D. Deb, A. K. Mukherjee, F. Hildebrand, M. R. Khan

This study examines how daily consumption of a fermented beverage affects the gut microbiome and health of a specific ethnic community in India.

bioRxiv · Jan 18, 2023 · PreprintMicrobiology

Diversification of small RNA pathways underlies germline RNAi incompetence in wild C. elegans strains

H. T. Chou, F. Valencia, J. C. Alexander, A. D. Bell, D. Deb, D. A. Pollard, A. B. Paaby

The paper investigates why some wild C. elegans strains show reduced RNAi responses, finding functional diversification in small RNA pathways.

bioRxiv · Aug 21, 2021Evolutionary Biology

Relationship Between Neuroendocrine and Immune Gene Expression in Small Cell Lung Cancer

L. Cai, H. Liu, F. Huang, J. Fujimoto, L. Girard, J. Chen, Y. Li, Y.-a. Zhang, D. Deb, V. Stastny, C. S. Kuo, G. Jia, C. Yang, W. Zou, A. Aloma, , A. F. Gazdar

This study examines the relationship between neuroendocrine and immune gene expression in SCLC, finding that variant SCLC tumors regain immune gene expression and exhibit higher tumor-immune interactions.

bioRxiv · Jul 28, 2020Cancer Biology

Broken force dispersal network in tip-links by the mutations induces hearing-loss

J. P. Hazra, A. Sagar, N. Arora, D. Deb, S. P. Kaur, S. Rakshit

The paper investigates how mutations in tip-link proteins disrupt force transmission in inner ear sensors, leading to hearing loss, and shows that Ca2+ can restore function in mutants.

bioRxiv · Apr 19, 2019Biophysics

A spatial cell culture model for predicting chemotherapy dosing strategies

S. Zhu, D. Deb, T. Danino

The paper develops a 2D spatial cell culture model to predict optimal chemotherapy dosing strategies by tracking tumor cell dynamics and building mathematical models of chemosensitive and chemoresistant populations.

bioRxiv · Feb 28, 2019 · PreprintCancer Biology

An oomycete RXLR effector triggers antagonistic plant hormone crosstalk to suppress host immunity

R. Anderson, D. Deb, J. Withers, S. Y. He, J. McDowell

The paper shows that the oomycete effector HaRxL10 targets JAZ3 to inhibit SA signaling and suppress plant immunity through JA-SA crosstalk.

bioRxiv · Feb 26, 2019 · PreprintPlant Biology