Author

S. Ishida

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 4 Plant Biology· 4

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell type annotation· 5 Research Focus:clustering· 3 Organism:plant (other)· 3 Assay:proteomics· 3 Research Focus:development & morphogenesis· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

T. Kohchi· 3 shared A. UMEZAWA· 2 shared H. Akutsu· 2 shared R. Nishihama· 2 shared T. Kimura· 2 shared T. Kiyono· 2 shared A. Cartier· 1 shared A. Inoue· 1 shared

Activity by Year

2018-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 11 mutual co-author links

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3 shared papersPlant Biology

T. Kohchi

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

A novel kit mutant rat enables hematopoietic stem cell engraftment without irradiation

R. IIDA, S. ISHIDA, J. WANG, K. HATTORI, K. YOSHIMI, S. YAMAZAKI, T. Mashimo

This study introduces a KitV834M mutant rat model that supports HSC engraftment without irradiation, offering a larger-scale alternative to mouse models for HSC research.

bioRxiv · Sep 12, 2023 · PreprintCell Biology

Human intestinal organoid-derived PDGFRα+ mesenchymal stroma empowers LGR4+ epithelial stem cells

C. JunLong, S. Horiuchi, S. Kuramochi, T. Kawasaki, H. Kawasumi, S. Akiyama, T. Arai, K. Morinaga, T. Kimura, T. Kiyono, H. Akutsu, S. Ishida, A. UMEZAWA

This study shows that organoid-derived mesenchymal stromal cells support the proliferation and functionality of hPSC-derived small intestinal epithelial stem cells in adherent culture.

bioRxiv · Aug 16, 2023 · PreprintCell Biology

In depth amino acid mutational analysis of the key interspecific incompatibility transmembrane factor Stigmatic Privacy 1

Y. Kato, S. Tadokoro, S. Ishida, M. Niidome, Y. Kimura, S. Takayama, S. Fujii

The paper identifies key amino acid residues in SPRI1 critical for its function in interspecific incompatibility in Arabidopsis thaliana.

bioRxiv · Apr 11, 2023 · PreprintPlant Biology

Switching secretory pathway direction for organelle acquisition in plants

T. Kanazawa, H. Morinaka, K. Ebine, T. L. Shimada, S. Ishida, N. Minamino, K. Yamaguchi, S. Shigenobu, T. Kohchi, A. Nakano, T. Ueda

The paper identifies a mechanism in liverworts for acquiring oil bodies through switching secretory pathway direction during cellular phase transitions.

bioRxiv · Mar 2, 2020Plant Biology

Immortalization of human zone I hepatocytes from biliary atresia with CDK4R24C, cyclin D1, and TERT for cytochrome P450 induction testing

M. Nishiwaki, M. Toyoda, Y. Oishi, S. Ishida, S.-i. Horiuchi, H. Makino, T. Kimura, S.-i. Ohno, T. Ohkura, S. Enosawa, H. Akutsu, A. Nakazawa, M. Kasahara, T. Kiyono, A. Umezawa

The paper describes the creation of an immortalized hepatocyte cell line, HepaMN, from biliary atresia tissue and demonstrates its utility for cytochrome P450 induction testing.

bioRxiv · Aug 8, 2019 · PreprintCell Biology

Lateral organ diversification in plants mediated by the ALOG protein family of transcription factors

S. Naramoto, V. A. S. Jones, N. Trozzi, M. Sato, K. Toyooka, M. Shimamura, S. Ishida, K. Nishitani, K. Ishizaki, R. Nishihama, T. Kohchi, L. Dolan, J. Kyozuka

The paper identifies MpTAW1, an ALOG family protein in Marchantia polymorpha, as a regulator of lateral organ development and meristem maintenance, showing its conserved function in specifying lateral organ identity across plant lineages.

bioRxiv · Jul 2, 2019 · PreprintPlant Biology

Heterotypic inter-GPCR β-arrestin coupling regulates lymphatic endothelial junctional architecture in murine lymph nodes

Y. Hisano, M. Kono, E. Engelbrecht, K. Kawakami, K. Yanagida, A. Cartier, S. Galvani, A. Kuo, Y. Ono, S. Ishida, J. Aoki, R. L. Proia, A. Inoue, T. Hla

The paper identifies LPAR1-induced S1PR1/β-arrestin coupling as a mechanism regulating lymphatic endothelial junctional architecture in murine lymph nodes.

bioRxiv · Oct 4, 2018Cell Biology

Efficient CRISPR/Cas9-based genome editing and its application to conditional genetic analysis in Marchantia polymorpha

S. S. Sugano, R. Nishihama, M. Shirakawa, J. Takagi, Y. Matsuda, S. Ishida, T. Shimada, I. Hara-Nishimura, K. Osakabe, T. Kohchi

This study develops efficient CRISPR/Cas9 vectors for genome editing in Marchantia polymorpha, achieving over 70% editing efficiency and enabling conditional genetic analysis.

bioRxiv · Mar 14, 2018Plant Biology