Author
S. S. Patel
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2017-2023 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 12 mutual co-author links13 papers
Recent·Most cited
- BiochemistrybioRxivPreprintDOI 10.1101/2023.09.25.559316
- BioengineeringbioRxivPreprint
Structural Optimization of siRNA Conjugates for Albumin Binding Achieves Effective MCL1-Targeted Cancer Therapy
E. Hoogenboezem, S. S. Patel, A. Cavnar…·C. Duvall
This paper optimizes siRNA conjugates for albumin binding to enhance tumor delivery and efficacy in cancer therapy, achieving 80% MCL1 silencing and improved survival in breast cancer models.
DOI 10.1101/2023.02.14.528574 - BiochemistrybioRxiv
The N-terminal domain of the human mitochondrial helicase Twinkle has DNA binding activity crucial for supporting processive DNA synthesis by Polymerase γ
DOI 10.1016/j.jbc.2022.102797 - BiochemistrybioRxivPreprint
Yeast mtDNA transcription initiation in single nucleotide addition steps
Q. Goovaerts, J. Shen, B. De Wijngaert…·K. Das
This study reports cryo-EM structures of yeast mitochondrial RNA polymerase initiation complexes, revealing the stepwise process of transcription initiation and the role of structural changes in RNA synthesis.
DOI 10.1101/2022.09.27.509796 - BiochemistrybioRxivPreprint
RIG-I uses its intrinsically disordered CARDs-Helicase linker in RNA proofreading functions
B. D. Schweibenz, S. C. Devarkar, M. Solotchi…·S. S. Patel
This study identifies a proofreading mechanism in RIG-I that uses the CARDs-Helicase Linker to gate RNA specificity and stabilize interactions, preventing non-specific RNA engagement.
DOI 10.1101/2021.09.23.461459 - ImmunologybioRxivPreprint
Indexable signal amplification for multiparametric imaging
P. D. Simonson, I. Valencia, S. S. Patel
The paper introduces tyramide-conjugated DNA barcodes for multiparametric imaging, enabling rapid antibody panel development without modifying primary antibodies.
DOI 10.1101/2021.06.03.446843 - BiophysicsbioRxiv
Cryo-EM structures reveal transcription initiation steps by yeast mitochondrial RNA polymerase
B. De Wijngaert, S. Sultana, C. Dharia…·K. Das
The paper uses cryo-EM to reveal steps of transcription initiation by yeast mitochondrial RNA polymerase, including promoter melting, template alignment, and abortive synthesis mechanisms.
- BiochemistrybioRxiv
Auto-inhibitory regulation of DNA binding by the C-terminal tails of the mitochondrial transcription factors Mtf1 and TFB2M
U. Basu, N. Mishra, M. Farooqui…·S. S. Patel
This study identifies autoinhibitory mechanisms in Mtf1 and TFB2M where the C-tail region regulates DNA binding activity through intramolecular interactions, which are relieved by RNA polymerase interaction.
DOI 10.1074/jbc.ra120.013338 - BioengineeringbioRxiv
Kupffer Cell Release of Platelet Activating Factor Drives Dose Limiting Toxicities of Nucleic Acid Nanocarriers
M. A. Jackson, S. S. Patel, F. Yu…·C. L. Duvall
This paper identifies Kupffer cell release of platelet activating factor (PAF) as a key driver of nanocarrier toxicity and shows that PAFR inhibition prevents dose-limiting toxicities in mice.
DOI 10.1016/j.biomaterials.2020.120528 - BiophysicsbioRxiv
The Dynamic Landscape of Transcription Initiation in Yeast Mitochondria
B.-K. Sohn, U. Basu, S.-W. Lee…·H. Kim
This study investigates the conformational dynamics of yeast mitochondrial transcription initiation using single-molecule techniques, revealing dynamic transitions and backtracking behavior.
DOI 10.1038/s41467-020-17793-2 - ZoologybioRxivPreprint
Neev, a novel long non-coding RNA, is expressed in chaetoblasts during regeneration of Eisenia fetida
S. S. Patel, S. Zunjarrao, B. Pillai
The paper identifies a novel lncRNA, Neev, expressed in regenerating earthworm segments and proposes it functions as a miRNA sponge to regulate chitin synthesis during regeneration.
DOI 10.1101/806661 - BiochemistrybioRxiv
Mitochondrial RNA capping: highly efficient 5’-RNA capping with NAD+ and NADH by yeast and human mitochondrial RNA polymerase
J. G. Bird, U. Basu, D. Kuster…·B. E. Nickels
The paper shows mitochondrial RNA polymerases in yeast and human cells efficiently cap RNA with NAD+ and NADH, linking metabolism to mitochondrial gene expression.
- Evolutionary BiologybioRxiv
The Rate Of Evolution Of Postmating-Prezygotic Reproductive Isolation In Drosophila
D. A. Turissini, J. A. McGirr, S. S. Patel…·D. R. Matute
The paper measures the rate of evolution of postmating-prezygotic reproductive isolation in Drosophila and finds it evolves faster than hybrid inviability but slower than premating isolation.
DOI 10.1093/molbev/msx271