Author

K. Manakongtreecheep

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Immunology· 4 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 5 Research Focus:cell-cell communication· 4 Research Focus:differential expression· 4 Organism:human· 4 Assay:proteomics· 4 Approach:statistical model· 4 Assay:scRNA-seq· 3 Approach:deep learning· 2

Frequent Co-Authors

A.-C. Villani· 3 shared J. Tantivit· 3 shared A. Tirard· 2 shared D. Juric· 2 shared K. Slowikowski· 2 shared L. Zubiri· 2 shared M. F. Thomas· 2 shared M. Nasrallah· 2 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersImmunology

A.-C. Villani

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Resident memory T cell development is associated with AP-1 transcription factor upregulation across anatomical niches.

N. P. Smith, Y. Yan, Y. Pan, J. B. Williams, K. Manakongtreecheep, S. Pant, J. Zhao, T. Tian, T. Pan, C. Stingley, K. Wu, J. Zhang, A. L. Kley, P. K. Sorger, A.-C. Villani, T. S. Kupper

This study identifies AP-1 transcription factors as key regulators of TRM development across tissues using scRNA-seq and ATAC-seq, revealing a novel mechanism for TRM reactivation.

bioRxiv · Sep 29, 2023 · PreprintImmunology

Immune Responses in Checkpoint Myocarditis Across Heart, Blood, and Tumor

S. M. Blum, D. A. Zlotoff, N. P. Smith, I. J. Kernin, S. Ramesh, L. Zubiri, J. Caplin, N. Samanta, S. C. Martin, A. Tirard, P. Sen, Y. Song, J. L. Barth, K. Slowikowski, M. Nasrallah, , A.-C. Villani

This study identifies immune cell types and biomarkers in irMyocarditis using single-cell RNA sequencing and TCR analysis across heart, blood, and tumor tissues.

bioRxiv · Sep 15, 2023 · PreprintImmunology

Longitudinal characterization of circulating neutrophils uncovers distinct phenotypes associated with disease severity in hospitalized COVID-19 patients

T. J. LaSalle, A. L. K. Gonye, S. S. Freeman, P. Kaplonek, I. Gushterova, K. R. Kays, K. Manakongtreecheep, J. Tantivit, M. Rojas-Lopez, B. C. Russo, N. Sharma, M. F. Thomas, K. M. Lavin-Parsons, B. M. Lilly, B. N. Mckaig, , M. Sade-Feldman

This study identifies distinct neutrophil phenotypes linked to disease severity in hospitalized COVID-19 patients using longitudinal data and multi-omics analyses.

Cell Reports Medicine · Oct 1, 2022Peer-reviewedImmunology

Altered interactions between circulating and tissue-resident CD8 T cells with the colonic mucosa define colitis associated with immune checkpoint inhibitors

M. Thomas, K. Slowikowski, K. Manakongtreecheep, P. Sen, J. Tantivit, M. Nasrallah, N. Smith, S. Ramesh, L. Zubiri, A. Tirard, B. Arnold, L. Nieman, J. Chen, T. Eisenhaure, K. Pelka, , A.-C. Villani

This study identifies altered interactions between circulating and tissue-resident CD8 T cells with the colonic mucosa in immune checkpoint inhibitor-associated colitis using single-cell RNA sequencing and other multi-omics approaches.

bioRxiv · Sep 17, 2021Immunology

Archaeal ribosomal proteins possess nuclear localization signal-type motifs: implications for the origin of the cell nucleus

S. V. Melnikov, H. S. Kwok, K. Manakongtreecheep, A. van den Elzen, C. C. Thoreen, D. Soll

The paper identifies NLS-type motifs in archaeal ribosomal proteins, showing they can functionally substitute eukaryotic NLSs and suggesting NLSs predate the nucleus.

bioRxiv · Jun 14, 2019Evolutionary Biology