Author

J. Hayes

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Animal Behavior & Cognition· 4 Microbiology· 2 Bioengineering· 1 Biophysics· 1 Immunology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:host-pathogen & immune response· 4 Approach:statistical model· 4 Assay:metagenomics· 3 Assay:behavioral assay· 2 Organism:Drosophila· 2 Research Focus:ecology & biodiversity· 2 Assay:imaging· 2

Frequent Co-Authors

O. Peleg· 3 shared R. Sarfati· 3 shared A. B. Ludi· 1 shared A. Burman· 1 shared A. Gray· 1 shared A. Keeble· 1 shared A. L. Goetsch· 1 shared A. L. Jones· 1 shared

Activity by Year

2018-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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3 shared papersAnimal Behavior & Cognition

O. Peleg

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Integrating Patient Metadata and Genetic Pathogen Data: Advancing Pandemic Preparedness with a Multi-Parametric Simulator

M. Bonjean, J. Ambroise, M. Connolly, J. Hayes, J. Hurel, A. sentis, F. Orchard, J.-L. Gala

This paper develops a multi-parametric simulator to link genetic pathogen data with patient metadata, enhancing pandemic preparedness through synthetic data generation and scenario customization.

bioRxiv · Aug 22, 2023 · PreprintBioengineering

Emergent periodicity in the collective synchronous flashing of fireflies

R. Sarfati, K. Joshi, O. Martin, J. Hayes, S. Iyer-Biswas, O. Peleg

This paper studies how fireflies synchronize their flashing in swarms and proposes a mathematical framework to explain the emergence of periodicity without fitting parameters.

eLife · Mar 13, 2023Peer-reviewedAnimal Behavior & Cognition

Patterns and determinants of the global herbivorous mycobiome

C. Meili, A. L. Jones, A. X. Arreola, j. Habel, C. J. Pratt, R. A. Hanafy, Y. Wang, A. S. Yassin, M. A. TagElDein, C. Moon, P. H. Janssen, M. Shrestha, P. Rajbhandari, M. Nagler, J. M. Vinzelj, , M. S. Elshahed

The paper analyzes AGF diversity across 661 fecal samples from 34 herbivorous species, identifying 56 novel genera and showing that both stochastic and deterministic processes shape AGF communities, with hindgut fermenters having stronger host-specific associations.

bioRxiv · Nov 21, 2022Microbiology

Resolution doubling in light-sheet microscopy via oblique plane structured illumination

B. Chen, B.-J. Chang, P. Roudot, F. Zhou, E. Sapoznik, M. Marlar-Pavey, J. Hayes, P. Brown, C.-W. Zeng, T. Lambert, J. R. Friedman, C.-L. Zhang, D. T. Burnette, D. P. Shepherd, K. M. Dean, R. P. Fiolka

This paper demonstrates isotropic resolution doubling in light-sheet microscopy using oblique plane structured illumination, achieving sub-150nm lateral resolution with reduced phototoxicity and faster volumetric imaging.

Nature Methods · Nov 1, 2022Peer-reviewedBiophysics

Microbial Community Dynamics Provide Evidence for Hypoxia During a Coral Reef Mortality Event

S. M. Doyle, M. J. Self, J. Hayes, K. E. F. Shamberger, A. M. S. Correa, S. Davies, L. Z. Santiago-Vazquez, J. B. Sylvan

The paper analyzes microbial community changes after a coral reef mortality event to infer hypoxia as a likely cause.

bioRxiv · Feb 24, 2022Microbiology

Predictive and motivational factors influencing anticipatory contrast: A comparison of contextual and gustatory predictors in food restricted and free-fed rats

J. Hayes, C. Garau, G. Chiacchierini, G. P. Urcelay, J. E. McCutcheon, J. Apergis-Schoute

The paper compares contextual and gustatory predictors of anticipatory negative contrast in food restricted and free-fed rats, finding distinct motivational processes underlying each.

bioRxiv · May 20, 2021Animal Behavior & Cognition

Self-organization in natural swarms of Photinus carolinus synchronous fireflies

R. Sarfati, J. Hayes, O. Peleg

The paper studies synchronization in natural swarms of Photinus carolinus fireflies, showing that high-density swarms produce synchronous flashes through local visual interactions.

bioRxiv · Jan 26, 2021Animal Behavior & Cognition

A COVID-19 vaccine candidate using SpyCatcher multimerization of the SARS-CoV-2 spike protein receptor-binding domain induces potent neutralising antibody responses

T. K. Tan, P. Rijal, R. Rahikainen, A. Keeble, L. Schimanski, S. Hussain, R. Harvey, J. Hayes, J. Edwards, R. McLean, V. Martini, M. Pedrera, N. Thakur, C. Conceicao, I. Dietrich, , R. Owens

This study develops a vaccine candidate using SpyCatcher technology to display the SARS-CoV-2 RBD, showing strong neutralizing antibody responses in mice and pigs.

bioRxiv · Aug 31, 2020Immunology

Spatiotemporal reconstruction of emergent flash synchronization in firefly swarms via stereoscopic 360-degree cameras

R. Sarfati, J. Hayes, E. Sarfati, O. Peleg

This study uses 360-degree cameras to track firefly flashes in 3D, revealing synchronization patterns and long-range interactions in swarms.

bioRxiv · Mar 19, 2020Animal Behavior & Cognition

Predicting division planes of three-dimensional cells by soap-film minimization

P. Martinez, L. Allsman, K. A. Brakke, C. Hoyt, J. Hayes, H. Liang, W. Neher, Y. Rui, A. Roberts, A. Moradifam, B. Goldstein, C. Anderson, C. G. Rasmussen

The paper develops a mathematical model to predict cell division planes in plants and animals by simulating soap-film minima, showing it matches observed division sites and avoids unfavorable junctions.

bioRxiv · Jul 23, 2018Plant Biology