Evaluation of Gene Set Enrichment Analysis (GSEA) tools highlights the value of single sample approaches over pairwise for robust biological discovery.
C. Bull, R. M. Byrne, N. C. Fisher, S. M. Corry, R. Amirkhah, J. Edwards, L. Hillson, M. Lawler, A. Ryan, F. Lamrock, P. D. Dunne, S. B. Malla
This study compares GSEA tools and finds single sample approaches better capture biological distinctions than pairwise methods in cancer recurrence analysis.
bioRxiv · Mar 15, 2024 · PreprintCancer Biology