Author

R. Foo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Cell Biology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Organism:human· 5 Approach:statistical model· 4 Research Focus:cell type annotation· 3 Assay:bulk RNA-seq· 2 Approach:deep learning· 2 Research Focus:gene regulatory network inference· 2 Assay:ChIP-seq· 1 Research Focus:clustering· 1

Frequent Co-Authors

M. I. Autio· 3 shared Z. Tiang· 3 shared A. Perrin· 2 shared A. Dashi· 1 shared A. Jacobsen Skanderup· 1 shared A. K. K. Teo· 1 shared A. L. K. Tan· 1 shared A. Mandoli· 1 shared

Activity by Year

2021-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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3 shared papersCell Biology

M. I. Autio

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Deciphering drug response and phenotypic heterogeneity of cancer cells using gene ensembles of regulatory units defined by chromatin domains

N. Pandey, M. Sharma, A. Mathur, G. A. Nzelu, M. Hakimullah, I. P. Jha, O. Chandra, S. Mishra, J. Bhattacharya, A. Sharma, R. Foo, K. S. Sandhu, A. Mandoli, R. DasGupta, V. KUMAR

The paper analyzes the relationship between TAD activity and drug response in cancer cells and patients, finding stronger correlations with TADs than individual genes.

bioRxiv · Jan 15, 2023 · PreprintCancer Biology

Computationally defined and in vitro validated putative genomic safe harbour loci for transgene expression in human cells

M. I. Autio, E. Motakis, A. Perrin, T. Bin Amin, Z. Tiang, D. V. Do, J. Wang, J. Tan, W. X. Tan, A. K. K. Teo, R. Foo

The paper identifies and validates 25 putative genomic safe harbour loci for transgene integration in human cells using computational analysis and in vitro experiments.

bioRxiv · Dec 7, 2021Bioengineering

The novel conserved NAD+ binding micropeptide SGHRT regulates mitochondrial function and metabolism in human cardiomyocytes

R. Foo, V. Do, N. Tulsian, W. Tan, Z. Li, L. Cheng, M. I. Autio, W. Tan, Z. Tiang, A. Perrin, J. Ching, C. Ramachandra, C. K. Lim, D. Hausenloy, C. Drum, , M. Lee

bioRxiv · Oct 24, 2021 · PreprintCell Biology

Integrative Epigenomic and High-Throughput Functional Enhancer Profiling Reveals Determinants of Enhancer Heterogeneity in Gastric Cancer

T. Sheng, S. W. T. Ho, W. F. Ooi, C. Xu, M. Xing, N. Padmanabhan, K. K. Huang, L. Ma, M. Ray, Y. A. Guo, S. N. Leng, C. G. Anene-Nzelu, M. M. Chang, M. Razavi-Mohseni, M. Beer, , P. Tan

The paper identifies enhancer heterogeneity in gastric cancer by integrating epigenomic data and functional assays, linking it to genetic and regulatory factors.

bioRxiv · Jun 9, 2021Cancer Biology

Long noncoding RNA VENTHEART is required for cardiomyocyte specification and function

A. Dashi, T. W. Lek Wen, G. Anene, B. Pan, M. I. Autio, Z. Tiang, R. Hartman, J. Stenzig, H. Wei, G. Chen, M. Ackers-Johnson, B. Lim, A. Walentinsson, V. Iyer, M. Jonsson, R. Foo

This study identifies VENTHEART as a lncRNA essential for cardiomyocyte specification, maturation, and function, with potential relevance to heart disease.

bioRxiv · Feb 1, 2021 · PreprintCell Biology