Author

M. Naser

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 4

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Assay:flow cytometry· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

G. K. Fragiadakis· 3 shared A. A. Rao· 2 shared A. Edwards· 2 shared A. J. Combes· 2 shared A. Shen· 2 shared B. Samad· 2 shared E. Mennillo· 2 shared I. Rusu· 2 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersImmunology

G. K. Fragiadakis

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Author profile →

4 papers

Recent·Most cited

Cyclone: an accessible pipeline to analyze, evaluate and optimize multiparametric cytometry data

R. K. Patel, R. G. Jaszczak, I. Kwok, N. D. Carey, T. Courau, D. Bunis, B. Samad, L. Avanesyan, N. W. Chew, S. Stenske, J. M. Jespersen, J. Publicover, A. Edwards, M. Naser, A. A. Rao, , G. K. Fragiadakis

Cyclone is a pipeline for analyzing, evaluating, and optimizing multiparametric cytometry data, demonstrating effectiveness across multiple cytometry technologies and biological contexts.

bioRxiv · Mar 8, 2023 · PreprintImmunology

Single-cell and spatial multi-omics highlight effects of anti-integrin therapy across cellular compartments in ulcerative colitis

E. Mennillo, Y. J. Kim, G. Lee, I. Rusu, R. Patel, L. C. Dorman, E. Flynn, S. Li, J. L. Bain, C. Andersen, A. Rao, S. Tamaki, J. Tsui, A. Shen, M. L. Lotstein, , M. G. Kattah

This study uses single-cell and spatial multi-omics to show VDZ affects mononuclear phagocyte subsets and highlights gene expression patterns in UC.

bioRxiv · Jan 21, 2023Immunology

Microbial signals and lymphotoxin drive TNF-independent death of A20 and ABIN-1 deficient epithelium

I. Rusu, E. Mennillo, J. L. Bain, Z. Li, X. Sun, K. Ly, Y. Y. Rosli, M. Naser, Z. Wang, R. Advincula, P. Achacoso, L. Shao, B. Razani, O. D. Klein, A. Marson, , M. G. Kattah

The paper shows that microbial signals, MyD88, and lymphotoxin contribute to TNF-independent intestinal injury after A20 and Abin-1 deletion in intestinal epithelial cells.

Journal of Clinical Investigation · Mar 1, 2022Peer-reviewedImmunology

A Pan-Cancer Census of Dominant Tumor Immune Archetypes

A. J. Combes, B. Samad, J. Tsui, N. W. Chew, P. Yan, G. C. Reeder, D. Kushnoor, A. Shen, B. Davidson, A. J. Barczac, M. Adkisson, A. Edwards, M. Naser, K. C. Barry, T. Courau, , M. F. Krummel

The paper identifies dominant immune system archetypes across 364 tumors from 12 cancer types using flow cytometry and transcriptomic data, linking them to tumor biology classifications.

bioRxiv · Apr 26, 2021 · PreprintImmunology