Author

D. Reynolds

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 4 Immunology· 1 Microbiology· 1 Scientific Communication & Education· 1 Zoology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:cell type annotation· 4 Assay:imaging· 3 Research Focus:clustering· 2 Approach:deep learning· 2 Research Focus:ecology & biodiversity· 2 Organism:human· 2 Organism:plant (other)· 2

Frequent Co-Authors

J. Zhou· 3 shared S. Griffiths· 2 shared A. Ai-Perreira· 1 shared A. B. Pine· 1 shared A. B. Rajurkar· 1 shared A. Bauer· 1 shared A. Breakspear· 1 shared A. Day· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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3 shared papersPlant Biology

J. Zhou

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Author profile →

8 papers

Recent·Most cited

Fast and efficient root phenotyping via pose estimation

E. M. Berrigan, L. Wang, H. Carrillo, K. Echegoyen, M. Kappes, J. Torres, A. Ai-Perreira, E. McCoy, E. Shane, C. D. Copeland, L. Ragel, C. Georgousakis, S. Lee, D. Reynolds, A. Talgo, , T. D. Pereira

This paper introduces a segmentation-free root phenotyping method using pose estimation, showing high accuracy and efficiency compared to segmentation-based approaches.

bioRxiv · Nov 20, 2023Plant Biology

The most remarkable migrants - systematic analysis of the Western European insect flyway at a Pyrenean mountain pass

W. L. Hawkes, T. Doyle, R. Massy, S. Weston, K. Davies, E. Cornelius, C. Collier, J. Chapman, D. Reynolds, K. Wotton

The paper systematically monitors insect migration at a Pyrenean mountain pass, finding a large annual insect flow influenced by environmental factors and estimating a significant bioflow across the mountain range.

bioRxiv · Jul 17, 2023Zoology

The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation

J. Meyers, M. Ramanathan, R. Shanderson, L. Donohue, I. Ferguson, M. Guo, D. Rao, W. Miao, D. Reynolds, X. Yang, Y. Zhao, Y.-Y. Yang, Y. Wang, P. Khavari

This paper identifies host proteins proximal to 17 SARS-CoV-2 viral proteins, revealing mechanisms of antiviral signaling disruption and host translation inhibition.

bioRxiv · Feb 23, 2021Microbiology

Increased complement activation is a distinctive feature of severe SARS-CoV-2 infection.

L. Ma, S. K. Sahu, M. Cano, V. Kuppuswamy, J. Bajwa, J. McPhatter, A. B. Pine, M. M. Meizlish, G. Goshua, C. H. Chang, H. Zhang, C. Price, P. Bahel, H. M. Rinder, T. Lei, , H. S. Kulkarni

The paper shows that complement activation is higher in severe SARS-CoV-2 infection compared to influenza and non-COVID respiratory failure, with the alternative pathway linked to worse outcomes.

bioRxiv · Feb 22, 2021Immunology

CropSurveyor: a scalable open-source experiment management system for distributed plant phenotyping and IoT-based crop management

D. Reynolds, J. Ball, A. Bauer, S. Griffiths, J. Zhou

CropSurveyor manages and integrates IoT-based crop phenotyping data from distributed sensors, enabling real-time monitoring and historical comparison of crop growth and environmental conditions.

GigaScience · Jan 31, 2019Peer-reviewedPlant Biology

Curriculum-based outdoor learning for children aged 9-11: A qualitative analysis of pupils' and teachers' views.

E. Marchant, C. Todd, R. Cooksey, S. Dredge, H. Jones, D. Reynolds, G. Stratton, R. Dwyer, R. Lyons, S. Brophy

This study explores the views of pupils and teachers on an outdoor learning program for children aged 9-11, finding benefits for engagement, behavior, and wellbeing, but noting barriers like testing demands and safety concerns.

bioRxiv · Jan 31, 2019Scientific Communication & Education

Leaf-GP: An Open and Automated Software Application for Measuring Growth Phenotypes for Arabidopsis and Wheat

J. Zhou, C. Applegate, A. Dobon Alonso, D. Reynolds, S. Orford, M. Mackiewicz, S. Griffiths, S. Penfield, N. Pullen

Leaf-GP is an open software tool for automated growth phenotype analysis in plants, capable of processing large image datasets and extracting multiple growth traits from Arabidopsis and wheat.

bioRxiv · Aug 25, 2017Plant Biology

Speed breeding: a powerful tool to accelerate crop research and breeding

A. Watson, S. Ghosh, M. Williams, W. S. Cuddy, J. Simmonds, M.-D. Rey, M. A. M. Hatta, A. Hinchliffe, A. Steed, D. Reynolds, N. Adamski, A. Breakspear, A. Korolev, T. Rayner, L. E. Dixon, , L. T. Hickey

This paper introduces speed breeding, a method that accelerates crop research and breeding by shortening generation times and enabling more generations per year.

bioRxiv · Jul 9, 2017Plant Biology