Author

S. Naik

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 5 Ecology· 2 Biophysics· 1 Cancer Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 9 Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Organism:mouse· 4 Research Focus:host-pathogen & immune response· 3 Organism:human· 3 Assay:proteomics· 3 Assay:scRNA-seq· 2

Frequent Co-Authors

A. C. Telfer· 2 shared C. N. Sobel· 2 shared C. Steinke· 2 shared E. V. Zakharov· 2 shared J. E. Sones· 2 shared J. R. deWaard· 2 shared J. T. A. McKeown· 2 shared L. Suksanpaisan· 2 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersEcology

A. C. Telfer

Mutual co-authors in cluster

Author profile →

10 papers

Recent·Most cited

Interferon-sensitized hematopoietic progenitors dynamically alter organismal immunity

M. Guillamot, I. Subudhi, V. Paraskevopoulou, A. Prystupa, I. Sidhu, A. Yeaton, M. Laskou, C. Hannemann, C. Donahoe, D. Wiseman, I. Aifantis, S. Naik, A. Weinstock

This study shows that transient skin inflammation activates hematopoietic stem/progenitor cells via type I interferon, altering systemic immunity and affecting atherosclerosis and influenza outcomes.

bioRxiv · Apr 24, 2024Immunology

A multi-track landscape of haematopoiesis informed by cellular barcoding and agent-based modelling

D. Lin, S. Zhang, J. Schreuder, J. Tran, D. Metcalf, T. Sargeant, A. P. Ng, T. S. Weber, S. Naik

This study uses cellular barcoding and agent-based modeling to reveal clonal fate patterns in hematopoiesis, showing that stem and progenitor cells are often less multipotent than previously thought.

bioRxiv · Mar 28, 2024 · PreprintImmunology

Neoadjuvant systemic oncolytic vesicular stomatitis virus is safe and may enhance long-term survivorship in dogs with naturally occurring osteosarcoma.

K. M. Makielski, A. L. Sarver, M. S. Henson, K. M. Stuebner, A. Borgatti, L. Suksanpaisan, C. Preusser, A.-F. Tabaran, I. Cornax, M. G. O'Sullivan, A. Chehadeh, D. Groschen, K. Bergsrud, S. Pracht, A. Winter, , S. Naik

This study evaluates neoadjuvant oncolytic virus therapy in dogs with osteosarcoma, finding it safe and associated with increased long-term survivorship and immune gene expression.

bioRxiv · Apr 16, 2023Cancer Biology

Development and validation of IMMUNO-COV: a high-throughput clinical assay for detecting antibodies that neutralize SARS-CoV-2

R. Vandergaast, T. Carey, S. Reiter, P. Lech, C. Gnanadurai, M. Tesfay, J. Buehler, L. Suksanpaisan, S. Naik, B. Brunton, J. Recker, M. Haselton, C. Ziegler, A. Roesler, J. R. Mills, , S. J. Russell

The paper develops and validates IMMUNO-COV, a high-throughput assay that accurately quantifies SARS-CoV-2-neutralizing antibodies in human sera.

bioRxiv · May 26, 2020 · PreprintImmunology

Differential tissue stiffness of body column facilitates locomotion of Hydra on solid substrates

S. Naik, M. K. Unni, D. Sinha, S. S. Rajput, C. R. Puli, E. Kartvelishvily, I. Solomonov, I. Sagi, A. Chatterji, S. Patil, S. Galande

This study shows that differential tissue stiffness in Hydra's body column enables somersaulting locomotion on solid substrates, supported by mechanical measurements and computational models.

bioRxiv · Feb 29, 2020Biophysics

A reference library for the identification of Canadian invertebrates: 1.5 million DNA barcodes, voucher specimens, and genomic samples

J. R. deWaard, S. Ratnasingham, E. V. Zakharov, A. V. Borisenko, D. Steinke, A. C. Telfer, K. H. J. Perez, J. E. Sones, M. R. Young, V. Levesque-Beaudin, C. N. Sobel, A. Abrahamyan, K. Bessonov, G. Blagoev, S. L. deWaard, , P. D. N. Hebert

The paper provides DNA barcodes for 1.5 million Canadian invertebrate specimens to improve taxonomic identification and biodiversity research.

bioRxiv · Jul 14, 2019 · PreprintEcology

Dietary intake regulates the circulating inflammatory monocyte pool

S. Jordan, N. Tung, M. Casanova-Acebes, C. Chang, C. Cantoni, D. Zhang, T. H. Wirtz, S. Naik, S. A. Rose, C. N. Brocker, A. Gainullina, B. B. Maier, D. LeRoith, F. J. Gonzalez, F. Meissner, , M. Merad

This study shows that fasting reduces circulating pro-inflammatory monocytes and their metabolic activity, while preserving their emergency mobilization during acute inflammation.

bioRxiv · Mar 21, 2019Immunology

Deciphering the Regulatory Landscape of γδ T Cell Development by Single-Cell RNA-Sequencing

Sagar, M. Pokrovskii, J. S. Herman, S. Naik, E. Sock, U. Lausch, M. Wegner, Y. Tanriver, D. R. Littman, D. Grün

This study uses single-cell RNA-sequencing to uncover the developmental trajectory of γδ T cells, identifying c-MAF as a key regulator of IL-17-producing γδ T cell differentiation.

bioRxiv · Nov 27, 2018 · PreprintImmunology

Comparison of two commercial ELISA kits for detection of rubella specific IgM and IgG antibodies

R. Viswanathan, S. George, M. V. Murhekar, A. M. Abraham, M. P. Singh, S. Jadhav, V. Nag, S. Naik, C. G. Raut, A. Munivenkatappa, M. Gupta, V. Jagtap, O. Kaduskar, N. Gupta, G. N. Sapkal

This study compares two ELISA kits for detecting rubella-specific IgM and IgG antibodies, finding good qualitative agreement and suggesting Euroimmun as a viable alternative.

bioRxiv · Apr 21, 2018Microbiology

Expedited Assessment of Terrestrial Arthropod Diversity by Coupling Malaise Traps with DNA Barcoding

J. R. deWaard, V. Levesque-Beaudin, S. L. deWaard, N. V. Ivanova, J. T. A. McKeown, R. Miskie, S. Naik, K. Perez, S. Ratnasingham, C. N. Sobel, J. E. Sones, C. Steinke, A. C. Telfer, A. D. Young, M. R. Young, , P. D. N. Hebert

This paper describes protocols combining Malaise traps and DNA barcoding to rapidly assess arthropod diversity, demonstrating their use in a national park survey of 20,000 specimens representing 2200 species.

bioRxiv · Sep 25, 2017Ecology