Author

Q. Ran

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 6 Cell Biology· 1 Ecology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 6 Approach:experimental assay· 5 Research Focus:cell type annotation· 4 Organism:plant (other)· 4 Research Focus:host-pathogen & immune response· 3 Organism:mouse· 3 Approach:statistical model· 3 Approach:biophysical modeling· 1

Frequent Co-Authors

S. T. M. Lee· 6 shared B. Feehan· 4 shared K. Ward· 4 shared A. Kamke· 3 shared S. Pogranichniy· 3 shared S. Sarkar· 3 shared E. Hartung· 2 shared K. Monk· 2 shared

Activity by Year

2019-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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6 shared papersMicrobiology

S. T. M. Lee

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

Eubacterium rectale detoxification mechanism increases resilience of the gut environment

T. G. Richie, H. Wiechman, C. Ingold, L. Heeren, A. Kamke, S. Pogranichniy, K. Monk, T. Summers, Q. Ran, S. Sarkar, B. L. Plattner, A. M. Sidebottom, E. Chang, S. T. M. Lee

This study identifies Eubacterium rectale's detoxification mechanism, showing its ability to reduce ROS and inflammation in gut cells through glutathione production.

bioRxiv · May 9, 2024 · PreprintMicrobiology

Home-field advantage affects the local adaptive interaction between Andropogon gerardii ecotypes and rhizobiome

A. Kazarina, S. Sarkar, S. Thapa, L. Heeren, A. Kamke, K. Ward, E. Hartung, Q. Ran, M. Galliart, A. Jumpponen, L. Johnson, S. T. M. Lee

This study shows that Andropogon gerardii ecotypes have a home-field advantage in recruiting rhizosphere microbes adapted to their local environments, supporting the home field advantage hypothesis.

bioRxiv · Jan 4, 2023 · PreprintMicrobiology

High proportions of single-nucleotide variations associated with multidrug resistance in swine gut microbial populations

B. Feehan, Q. Ran, K. Monk, T. G. Nagaraja, M. D. Tokach, R. G. Amachawadi, S. T. M. Lee

The paper identifies multidrug-resistant microbial populations in swine gut microbiomes through metagenomic analysis of antibiotic-treated and control groups.

bioRxiv · Dec 3, 2022 · PreprintMicrobiology

Novel Complete Methanogenic Pathways in Longitudinal Genomic Study of Monogastric Age-Associated Archaea

B. Feehan, Q. Ran, V. Dorman, K. Rumback, S. Pogranichniy, K. Ward, R. Goodband, M. Niederwerder, S. T. M. Lee

This study identifies novel methanogenic pathways in swine archaea across age, revealing acetoclastic methanogenesis in monogastric archaea and their presence across multiple hosts and time periods.

bioRxiv · Dec 3, 2022Microbiology

Culturomics of Andropogon gerardii rhizobiome revealed nitrogen transforming capabilities of stress-tolerant Pseudomonas under drought conditions

S. Sarkar, A. Kamke, K. Ward, E. Hartung, Q. Ran, B. Feehan, M. Galliart, A. M. Jumpponen, L. Johnson, S. T. M. Lee

The study identifies stress-tolerant Pseudomonas in the rhizobiome of Andropogon gerardii under drought, revealing nitrogen transformation capabilities that may support plant growth.

bioRxiv · Jul 18, 2022 · PreprintMicrobiology

Stability and volatility shape the gut bacteriome and mycobiome dynamics in a pig model

B. Feehan, Q. Ran, V. Dorman, K. Rumback, S. Pogranichniy, K. Ward, R. Goodband, M. C. Niederwerder, K. L. Summers, S. T. M. Lee

This study examines gut microbiome dynamics in pigs, identifying distinct bacterial and fungal patterns across developmental stages and their correlations.

bioRxiv · Feb 2, 2022 · PreprintMicrobiology

Lipid hydroperoxides promote sarcopenia through carbonyl stress

H. Eshima, J. L. Shahtout, P. Siripoksup, M. J. Pearson, Z. S. Mahmassani, P. J. Ferrara, A. W. Lyons, J. A. Maschek, A. D. Peterlin, A. R. P. Verkerke, J. M. Johnson, A. Salcedo, J. J. Petrocelli, E. R. Miranda, E. J. Anderson, , K. Funai

This study shows lipid hydroperoxides contribute to sarcopenia by causing carbonyl stress, and their neutralization prevents muscle atrophy and weakness.

bioRxiv · Dec 17, 2021Physiology

Homogeneous environmental selection overturns distance-decay relationship of soil prokaryotic community

B. Zhang, K. Xue, S. Zhou, K. Wang, W. Liu, C. Xu, L. Cui, L. Li, Q. Ran, R. Hu, Y. Hao, X. Cui, Y. Wang

The paper shows that environmental selection overrides the distance-decay pattern in soil prokaryotic communities across biomes, revealing a U-shape pattern due to homogeneous environmental factors.

bioRxiv · May 13, 2021Ecology

Crif1 Promotes Osteoporosis in Mice after Radiation

L. Xiang, L. Chen, Y. Xiang, F. Li, X. Zhang, Y. Xiao, L. Zou, J. F. Zhong, S. C. Li, Q. Ran, Z. Li

This study shows that Crif1 promotes radiation-induced osteoporosis in mice by increasing RANKL expression and that targeting Crif1 could be a therapeutic strategy.

bioRxiv · Aug 5, 2019Cell Biology