Author

J. Sui

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Cell Biology· 1 Immunology· 1 Microbiology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Organism:mouse· 3 Assay:bulk RNA-seq· 2 Approach:contrastive learning· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Research Focus:drug response / drug discovery· 2

Frequent Co-Authors

W. Yan· 2 shared X. Liu· 2 shared X. Wang· 2 shared C. Ji· 1 shared C. Kliment· 1 shared C. Wang· 1 shared D. Zhi· 1 shared H. Liu· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersBioengineering

W. Yan

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

LRG1 promotes atherosclerosis by activating macrophages

J. Wang, S. Zhang, J. Wang, J. Zhong, H. Liu, W. Li, M. Chen, L. Xu, W. Zhang, Z. Zhang, Z. Wei, J. Guo, X. Wang, J. Sui, X. Liu, X. Wang

This study identifies LRG1 as a pro-inflammatory factor in atherosclerosis by promoting macrophage M1 polarization through ERK and JNK pathways, and shows that LRG1 inhibition reduces atherosclerosis progression.

bioRxiv · Jan 23, 2024 · PreprintPathology

Single-cell RNA sequencing reveals recruitment of the M2-like CCL8high macrophages in Lewis lung carcinoma-bearing mice following hypofractionated radiotherapy

H. Yang, Z. Lei, J. He, L. Zhang, T. Lai, L. Zhou, N. Wang, Z. Tang, J. Sui, Y. Wu

This study uses single-cell RNA sequencing to show hypofractionated radiotherapy recruits CCL8high macrophages, reprograms them to an immunosuppressive state, and enhances tumor growth, which can be counteracted by CCL inhibitor Bindarit.

bioRxiv · Jan 15, 2024 · PreprintImmunology

Maximum Classifier Discrepancy Generative Adversarial Network for Jointly Harmonizing Scanner Effects and Improving Reproducibility of Downstream Tasks

W. Yan, Z. Fu, R. Jiang, J. Sui, V. Calhoun

This paper introduces MCD-GAN, a method that harmonizes scanner effects in MRI data while preserving biological information, improving cross-scanner classification performance.

bioRxiv · Nov 19, 2022Bioengineering

Loss of ANT1 Increases Fibrosis and Epithelial Cell Senescence in Idiopathic Pulmonary Fibrosis

J. C. Boatz, J. Sui, Q. Hu, X. Li, Y. Zhang, M. Koenigshoff, C. Kliment

This study shows that loss of ANT1 increases fibrosis and epithelial cell senescence in IPF by causing mitochondrial dysfunction.

bioRxiv · Sep 9, 2022 · PreprintCell Biology

FUNCTIONAL NETWORK CONNECTIVITY (FNC)-BASED GENERATIVE ADVERSARIAL NETWORK (GAN) AND ITS APPLICATIONS IN CLASSIFICATION OF MENTAL DISORDERS

J. Zhao, D. Zhi, W. Yan, V. D. Calhoun, J. Sui

This paper introduces an FNC-based GAN for classifying mental disorders from fMRI data, achieving higher accuracy than existing methods in MDD and schizophrenia classification.

Journal of Neuroscience Methods · Jul 1, 2020Peer-reviewedBioengineering

Isolation and characterization of antagonistic bacteria with the potential for biocontrol of soil-borne wheat diseases

X. Wang, C. Wang, C. Ji, Q. Li, J. Zhang, X. Song, J. Sui, Z. Liu, J. Du, X. Liu

This study isolates and characterizes Bacillus amyloliquefaciens subsp. plantarum XH-9, showing it promotes plant growth and suppresses Fusarium oxysporum in wheat.

bioRxiv · May 18, 2018Microbiology