Author
R. J. DeBerardinis
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2019-2023 · peak 6/yrCo-Author Collaboration Network
10 top collaborators · 45 mutual co-author links20 papers
Recent·Most cited
- Cancer BiologybioRxiv
Lysosomal mitochondrial interaction promotes tumor growth in squamous cell carcinoma of the head and neck
A. Gopalkrishnan, N. Wang, S. Cruz-Rangel…·U. Duvvuri
This study shows that lysosomal-mitochondrial interaction (LMI) promotes tumor growth in squamous cell carcinoma of the head and neck by enhancing mitochondrial complex I activity and lysosomal function.
DOI 10.1158/1541-7786.mcr-24-0337 - Cancer BiologybioRxiv
Stable isotope tracing in human plasma-like medium reveals metabolic and immune modulation of the glioblastoma microenvironment
M. R. Savani, M. El Shami, L. C. Gattie…·K. G. Abdullah
This paper develops an in vitro method using human plasma-like medium to study glioma metabolism and immune interactions, revealing microenvironment-dependent metabolic features and immune responses.
DOI 10.1093/neuonc/noaf248 - BiochemistrybioRxiv
Electron transport inhibition increases cellular dependence on purine transport and salvage
Z. Wu, D. Bezwada, R. C. Harris…·R. J. DeBerardinis
This study shows that ETC inhibition in cancer cells increases reliance on purine salvage and transport, revealing a metabolic vulnerability in tumors with low oxidative metabolism.
DOI 10.1016/j.cmet.2024.05.014 - Cancer BiologybioRxiv
FASN-deficiency induces a cytosol-to-mitochondria citrate flux to mitigate detachment-induced oxidative stress
W. Dai, Z. Wang, G. Wang…·L. Jiang
This study shows that FASN-deficiency leads to a cytosol-to-mitochondria citrate flux via IDH1 and CTP, which helps cancer cells resist oxidative stress during detachment.
DOI 10.1016/j.celrep.2023.112971 - Cancer BiologybioRxiv
Mitochondrial metabolism in primary and metastatic human kidney cancers
D. Bezwada, R. J. DeBerardinis, N. P. Lesner…·V. Margulis
This study investigates mitochondrial metabolism in kidney cancers, finding that primary tumors have suppressed mitochondrial function while metastases show enhanced TCA cycle labeling.
DOI 10.1038/s41586-024-07812-3 - Cancer BiologybioRxiv
In-vivo characterization of glutamine metabolism identifies therapeutic targets in clear cell renal cell carcinoma
A. Kaushik, L. K. Burroughs, A. Tarangelo…·R. J. DeBerardinis
The paper identifies multiple glutamine metabolism pathways in ccRCC tumorgrafts and shows that targeting amidotransferase activity reduces tumor growth.
DOI 10.1126/sciadv.abp8293 - Cancer BiologybioRxivPreprint
Adipocytes reprogram glucose metabolism in cancer cells promoting metastasis
A. Mukherjee, D. Bezwada, M. Zandbergen…·E. Lengyel
This study shows adipocytes reprogram cancer cell glucose metabolism to promote metastasis by increasing lipid synthesis via HIF1 regulation.
DOI 10.1101/2022.10.17.512437 - Cancer BiologybioRxivPreprint
The small cell lung cancer neuroendocrine transdifferentiation explorer
L. Cai, V. Sondhi, M. Zhu…·A. Gazdar
This study curates genes associated with NE transdifferentiation in SCLC and compares transcriptomic changes across multiple datasets to create a web tool for exploring NE transdifferentiation in SCLC and NBL.
- BiochemistrybioRxiv
Comprehensive isotopomer analysis of glutamate and aspartate in small tissue samples
F. Cai, D. J. Bezwada, L. Cai…·R. J. DeBerardinis
This paper develops an MS method to analyze all 16 aspartate and 32 glutamate isotopomers with high sensitivity, enabling pathway discrimination and metabolic heterogeneity studies in human tumors.
DOI 10.1016/j.cmet.2023.07.013 - BiochemistrybioRxivPreprint
The anti-angiogenic compound dimethyl fumarate inhibits the serine synthesis pathway and increases glycolysis in endothelial cells
M. C. Ocana, C. Yang, M. Bernal…·M. A. Medina
This study shows dimethyl fumarate inhibits serine synthesis and increases glycolysis in endothelial cells, potentially explaining its anti-angiogenic effects.
DOI 10.1101/2021.12.13.472337 - Cancer BiologybioRxiv
De Novo Pyrimidine Synthesis is a Targetable Vulnerability in IDH Mutant Glioma
D. D. Shi, M. R. Savani, M. M. Levitt…·McBray
This study identifies de novo pyrimidine synthesis as a therapeutic target in IDH mutant gliomas, showing that DHODH inhibitors are effective in preclinical models.
DOI 10.1016/j.ccell.2022.07.011 - Cancer BiologybioRxivPreprint
G6PD deficiency sensitizes metastasizing melanoma cells to oxidative stress and glutaminolysis
A. B. Aurora, V. Khivansara, A. Leach…·S. J. Morrison
This study shows that G6PD deficiency in melanoma cells increases oxidative stress and glutaminolysis, reducing metastasis by making cells more vulnerable to metabolic disruption.
DOI 10.1101/2021.11.11.468286 - Cancer BiologybioRxivPreprint
Mitochondrial pyruvate supports lymphoma proliferation by fueling a non-canonical glutamine metabolism pathway
P. Wei, A. J. Bott, A. A. Cluntun…·J. Rutter
This study identifies a non-canonical glutamine metabolism pathway in DLBCLs where mitochondrial pyruvate supports glutaminolysis and proliferation, particularly in solid extracellular matrix environments.
DOI 10.1101/2021.08.26.457847 - ImmunologybioRxiv
Clinically-relevant T cell expansion protocols activate distinct cellular metabolic programs and phenotypes
S. MacPherson, S. Keyes, M. K. Kilgour…·J. J. Lum
The paper compares five T cell expansion protocols and finds they induce distinct metabolic programs and phenotypes, with some conditions impairing T cell function despite metabolic adaptation.
DOI 10.1016/j.omtm.2022.02.004 - Cell BiologybioRxiv
Differential requirements for mitochondrial electron transport chain components in the adult murine liver
N. P. Lesner, X. Wang, Z. Chen…·P. Mishra
This study investigates the tissue-specific roles of mitochondrial complex I and IV in adult mouse liver, finding that complex I loss is tolerated while complex IV dysfunction causes metabolic and functional impairments.
DOI 10.7554/elife.80919 - Cancer BiologybioRxiv
Relationship Between Neuroendocrine and Immune Gene Expression in Small Cell Lung Cancer
L. Cai, H. Liu, F. Huang…·A. F. Gazdar
This study examines the relationship between neuroendocrine and immune gene expression in SCLC, finding that variant SCLC tumors regain immune gene expression and exhibit higher tumor-immune interactions.
DOI 10.1038/s42003-021-01842-7 - ImmunologybioRxiv
1-Methylnicotinamide is an immune regulatory metabolite in human ovarian cancer
M. K. Kilgour, S. MacPherson, L. Zacharias…·J. J. Lum
This study identifies 1-methylnicotinamide (MNA) as an immune regulatory metabolite in high-grade serous ovarian cancer, showing its role in modulating T cell function through non-cell autonomous mechanisms.
DOI 10.1126/sciadv.abe1174 - Cancer BiologybioRxivPreprint
The hexosamine biosynthesis pathway is a targetable liability in lung cancers with concurrent KRAS and LKB1 mutations.
J. Kim, F. Cai, B. Ko…·R. J. DeBerardinis
The paper identifies the hexosamine biosynthesis pathway as a metabolic vulnerability in KRAS/LKB1 mutant lung cancers and shows GFPT2 inhibition reduces tumor growth.
- Cancer BiologybioRxiv
METABOLIC DIVERSITY IN HUMAN NON-SMALL CELL LUNG CANCER CELLS
P.-H. CHEN, L. Cai, C. Yang…·R. J. DeBerardinis
The paper quantifies metabolic features in NSCLC cell lines to explore associations between metabolism and other cell-autonomous processes.
DOI 10.1016/j.molcel.2019.08.028