Author
A. Jain
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2017-2024 · peak 12/yrCo-Author Collaboration Network
10 top collaborators · 36 mutual co-author links63 papers
Recent·Most cited
Characterizing Excretory-Secretory Products Proteome Across Larval Development Stages in Ascaris suum
S. Castaneda, G. Adeniyi-Ipadeola, Y. Wu, C. Suarez-Reyes, A. Jain, J. D. Ramirez Gonzalez, J. Weatherhead
This study characterizes the excretory-secretory proteome of Ascaris suum larvae across developmental stages to identify potential therapeutic targets for ascariasis prevention.
bioRxiv · Jul 3, 2024 · PreprintMicrobiology
Tackling Anticancer Drug Resistance and Endosomal Escape in Aggressive Brain Tumors Using Bioelectronics
A. Jain, P. Wade, S. Stolnik, A. H. Hume, I. D. Kerr, B. Coyle, F. Rawson
This study shows that alternating current can enhance drug delivery and overcome resistance in brain tumors by modulating intracellular trafficking.
bioRxiv · Jun 3, 2024Pharmacology & Toxicology
Development and Initial Characterization of Pigs with DNAI1 Mutations and Primary Ciliary Dyskinesia
M. H. Abou Alaiwa, B. M. Hilkin, M. P. Price, N. D. Gansemer, M. R. Rector, M. R. Stroik, L. S. Powers, K. M. Whitworth, M. S. Samuel, A. Jain, L. S. Ostedgaard, S. E. Ernst, W. Philibert, L. D. Boyken, T. O. Moninger, , D. A. Stoltz
This paper develops a PCD pig model with DNAI1 mutations and characterizes its respiratory and sinus disease features, showing similarities to human PCD.
bioRxiv · May 22, 2024 · PreprintPhysiology
Oncogenic Ras-driven Dorsal/NF-κB signaling contributes to tumorigenesis in a Drosophila carcinoma model
C. Dillard, J. Teles-Reis, A. Jain, R. Le Borgne, H. Jasper, T. E. Rusten
This study shows that oncogenic RasV12 activates Dorsal/NF-κB signaling, promoting tumor growth and malignancy in Drosophila melanogaster tumors.
bioRxiv · May 8, 2024 · PreprintCancer Biology
Regulation of angiogenesis by endocytic trafficking mediated by cytoplasmic dynein 1 light intermediate chain 1
D. Johnson, S. Colijn, J. Richee, J. Yano, M. Burns, A. E. Davis, V. N. Pham, A. Saric, A. Jain, Y. Yin, D. Castranova, M. Melani, M. Fujita, S. Grainger, J. S. Bonifacino, , A. N. Stratman
This study shows that LIC1 and RILPL1/2 restrict angiogenesis by promoting VEGFR2 degradation, and their disruption increases angiogenesis through enhanced Rab11-mediated recycling.
bioRxiv · Apr 1, 2024Cell Biology
Innate floral object identification in the generalist solitary hoverfly pollinator Eristalinus aeneus
A. Mishra, A. Jain, P. S. Iyer, A. Suryanarayanan, K. Nordstrom, S. B. Olsson
This study shows how the hoverfly Eristalinus aeneus uses innate integration of olfactory and visual cues to identify multiple floral species without prior experience.
bioRxiv · Feb 8, 2024 · PreprintAnimal Behavior & Cognition
FLUAV RAM-IGIP: A modified live influenza virus vaccine that enhances humoral and mucosal responses against influenza
C. J. Caceres, L. C. Gay, A. Jain, T. Mejias, M. Cardenas Perez, B. A. Seibert, F. Faccin, B. Cowan, G. Geiger, A. L. Vincent Baker, S. Carnaccini, D. H. Davies, D. S. Rajao, D. R. Perez
This paper develops a modified live influenza virus vaccine (RAM-IGIP) that enhances humoral and mucosal immunity against influenza, showing complete protection in mice.
bioRxiv · Jan 23, 2024 · PreprintImmunology
Targeting PKC alleviates iron overload in diabetes and hemochromatosis
S. Banerjee, S. Lu, A. Jain, I. Wang, H. Tao, S. Srinivasan, E. Nemeth, P. He
This study shows PKC inhibition reduces iron overload in diabetes and hemochromatosis by modulating ferroportin expression and trafficking.
bioRxiv · Nov 28, 2023 · PreprintCell Biology
GOT1 primes the cellular response to hypoxia by supporting glycolysis and HIF1α stabilisation
F. Grimm, A. Asuaje, A. Jain, M. Silva dos Santos, J. Kleinjung, P. M. Nunes, S. Gehrig, L. Fets, J. MacRae, D. Anastasiou
This study identifies GOT1 as a key factor in priming cells for hypoxic adaptation by enhancing glycolysis and HIF1α stabilization before full HIF1 activation.
bioRxiv · Sep 6, 2023 · PreprintCancer Biology
Assessing the global prevalence of wild birds in trade
P. F. Donald, E. Fernando, L. Brown, M. Busana, S. H. Butchart, S. Chng, A. de la Colina, J. Machado Ferreira, A. Jain, V. R. Jones, R. Lapido, K. Malsch, A. McDougall, C. Muccio, D. Nguyen, , R. Safford
This paper quantifies global bird trade prevalence using seven datasets, identifying species at risk and informing conservation strategies.
bioRxiv · Aug 9, 2023Ecology
Dearth of smoking-induced mutations in NSRO-driven non-small-cell lung cancer despite smoking exposure
C.-Y. Huang, N. Jiang, M. Shen, G. Lai, A. C. Tan, A. Jain, S. P. Saw, M.-K. Ang, Q. S. Ng, D. W.-T. Lim, R. Kanesvaran, E.-H. Tan, W. L. Tan, B.-H. Ong, K. L. Chua, , S. G. Rozen
The paper examines genomic and transcriptomic changes in NSRO-driven NSCLCs in smokers and non-smokers, finding no smoking-induced mutations but higher transcriptomic cell cycle activity in smokers.
bioRxiv · Jul 4, 2023 · PreprintCancer Biology
Mild ER Stress Impedes Regulated Secretion By Governing Key Exocytotic and granulogenic Molecular Switches
B. S. Sahu, M. Mukherjee, C. Mukherjee, V. Ghosh, A. Jain, s. sadhukhan, s. Dagar
The paper shows ER stress impairs DCV exocytosis in neuroendocrine cells by reducing key exocytotic and granulogenic switches via the CREB/ATF4/eIF2 axis.
bioRxiv · Apr 18, 2023 · PreprintCell Biology
Long-term evolution of proliferating cells using the eVOLVER platform
D. Garcia-Ruano, A. Jain, Z. J. Heins, B. G. Wong, E. Y. Wolle, A. S. Khalil, D. Coudreuse
The paper upgrades the eVOLVER platform to enable long-term, automated experimental evolution of proliferating cells with improved methodology, hardware, and software.
bioRxiv · Mar 28, 2023Evolutionary Biology
Wireless Electrical-Molecular Quantum Signalling for Cancer Cell Induced Death
A. Jain, J. Gosling, S. Liu, H. Wang, E. Stone, L. Perez Garcia, D. B. Amabilino, T. M. Fromhold, S. Smith, R. Rahman, Y. Long, L. Turyanska, F. Rawson
This paper demonstrates wireless electrical-molecular quantum signalling using bio-nanoantennae to induce apoptosis in cancer cells through quantum biological tunnelling.
bioRxiv · Mar 2, 2023 · PreprintBiophysics
Discovery of decreased ferroptosis in male colorectal cancer patients with KRAS mutations
H. Yan, R. Talty, A. Jain, Y. Cai, J. Zheng, X. Shen, E. Muca, P. Paty, M. Bosenburg, S. Khan, C. Johnson
This study identifies suppressed ferroptosis in male colorectal cancer patients with KRAS mutations, linking it to poorer survival outcomes.
bioRxiv · Feb 28, 2023Cancer Biology
Regulation of Ebola GP conformation and membrane binding by the chemical environment of the late endosome
A. Jain, R. Govindan, A. Berkman, J. Luban, N. D. Durham, J. Munro
This study investigates how acidic pH, Ca2+, and anionic phospholipids in the late endosome regulate Ebola GP conformation and membrane binding, revealing key residues and mechanisms involved in virus entry.
bioRxiv · Jan 18, 2023Biophysics
Evaluation of the morphological and biological functions of vascularized microphysiological systems with supervised machine learning
J. J. Tronolone, T. Mathur, C. Chaftari, A. Jain
The paper evaluates vascularized microphysiological systems using machine learning to predict oxygen transport function from morphological data.
bioRxiv · Jan 12, 2023Bioengineering
AngioMT: An in silico platform for digital sensing of oxygen transport through heterogenous microvascular networks
T. Mathur, J. J. Tronolone, A. Jain
AngioMT predicts oxygen distribution in microvascular networks using finite element methods, correlating with experimental results and providing insights into tissue oxygenation.
bioRxiv · Jan 9, 2023 · PreprintBioengineering
Steroid hormone imbalance drives macrophage infiltration and Spp1/osteopontin+ foam cell differentiation in the prostate
P. Popovics, K. O. Skalitzky, E. Schroeder, A. Jain, S. V. Silver, F. Van Fritz, K. S. Uchtmann, C. M. Vezina, W. A. Ricke
This study shows that steroid hormone imbalance in mice increases macrophage infiltration and Spp1/osteopontin+ foam cell differentiation in the prostate, with OPN knockout reducing these effects.
bioRxiv · Dec 13, 2022Pathology
Electric Field Responsive Nanotransducers for Glioblastoma
A. Jain, I. Jobson, M. Griffin, R. Rahman, S. Smith, F. J. Rawson
This paper investigates the use of gold, silica oxide, and zinc oxide nanoparticles to enhance the anticancer effects of electric fields on glioblastoma cells.
Bioelectronic Medicine · Oct 19, 2022Peer-reviewedCancer Biology
hERG1 channel subunit composition mediates proton inhibition of IKr in hiPSC CMs
C. U. Ukachukwu, E. N. Jimenez-Vazquez, A. Jain, D. K. Jones
This study shows that changes in hERG1a/1b subunit abundance in hiPSC-CMs affect IKr sensitivity to protons, with mature cells showing reduced inhibition.
bioRxiv · Aug 26, 2022 · PreprintPhysiology
KCNH2 encodes a nuclear-targeted polypeptide that mediates hERG1 channel gating and expression
A. Jain, O. Stack, S. Ghodrati, F. G. Sanchez-Conde, C. Ukachukwu, S. Salwi, E. N. Jimenez-Vazquez, D. K. Jones
This study identifies a nuclear-targeted hERG1 polypeptide, hERG1NP, encoded by KCNH2, which modulates hERG1 channel function during cardiac development.
bioRxiv · Aug 24, 2022 · PreprintCell Biology
The cynosure of CtBP: evolution of a bilaterian transcriptional corepressor
A.-M. Raicu, D. Kadiyala, M. Niblock, A. Jain, Y. Yang, K. M. Bird, K. Bertholf, A. Seenivasan, D. N. Arnosti
This study investigates the evolution of the CtBP transcriptional corepressor, showing its bilaterian origin, conserved CTD structure, and lineage-specific variations through alternative splicing and gene duplication.
bioRxiv · Jun 23, 2022Evolutionary Biology
Allosteric inactivation of an engineered optogenetic GTPase
A. Jain, N. V. Dokholyan, A. L. Lee
This paper uses NMR spectroscopy to study how light-induced allosteric changes in the Cdc42Lov fusion protein inhibit GTPase signaling, revealing structural and dynamic mechanisms of optogenetic control.
bioRxiv · May 16, 2022 · PreprintBiophysics
Structural basis of Omicron immune evasion: A comparative computational study of Spike protein-Antibody interaction.
D. Contractor, C. Globisch, S. Swaroop, A. Jain
This study uses computational methods to analyze how mutations in the Spike protein of Delta and Omicron variants affect antibody binding affinity and neutralization potential.
bioRxiv · Mar 15, 2022 · PreprintBiophysics
Modulation of the extracellular matrix by Streptococcus gallolyticus subsp. gallolyticus and importance in cell proliferation
R. Kumar, J. Taylor, A. Jain, S. Y. Jung, Y. Xu
This study shows Streptococcus gallolyticus subsp. gallolyticus upregulates collagen expression in CRC cells, which mediates its ability to promote cell proliferation and tumor growth.
bioRxiv · Mar 14, 2022Microbiology
Evidence for quinol oxidase activity of ImoA, a novel NapC/NirT family protein from the neutrophilic Fe(II) oxidizing bacterium Sideroxydans lithotrophicus ES-1
A. Jain, A. Coelho, J. Madjarov, S. Todorovic, R. O. Louro, J. A. Gralnick, C. M. Paquete
This study characterizes ImoA, a NapC/NirT family cytochrome from Sideroxydans lithotrophicus ES-1, showing it functions as a quinol oxidase and can replace CymA in electron transfer.
bioRxiv · Jan 10, 2022 · PreprintBiochemistry
Gene expression based inference of drug resistance in cancer
S. Chawla, A. Rockstroh, M. Lehman, E. Rather, A. Jain, A. Anand, A. Gupta, N. Bhattacharya, S. Poonia, P. Rai, N. Das, A. Majumdar, J. Jayadeva, G. Ahuja, B. G. Hollier, , D. Sengupta
This study uses gene expression data and machine learning to predict drug resistance in cancer by analyzing pathway activity patterns rather than gene expression levels alone.
bioRxiv · Nov 17, 2021Cancer Biology
Nuclear-injuries by aberrant dynein-forces defeat proteostatic purposes of Lewy Body Inclusions
S. Mansuri, A. Jain, R. Singh, S. Rawat, D. Mondal, S. Raychaudhuri
This study investigates how Lewy Bodies (LBs) and Syn-aggresomes interact in neurons, showing LBs overgrow and cause proteostatic issues through lamina injuries and dynein-force imbalances.
bioRxiv · Oct 29, 2021Cell Biology