Author
C. Lu
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2017-2024 · peak 13/yrCo-Author Collaboration Network
10 top collaborators · 11 mutual co-author links57 papers
Recent·Most cited
- Plant BiologybioRxiv
ITRAQ-based quantitative proteomic analysis of japonica rice seedling during cold stress
D. Qing, Y. Pan, G. Dai…·G. Deng
This study uses iTRAQ-based proteomics to identify cold stress-responsive proteins in japonica rice seedlings, finding 289 regulated proteins involved in photosynthesis and metabolism.
DOI 10.1270/jsbbs.21081 - ImmunologybioRxivPreprint
Epigenomic and transcriptomic differences between low-grade and acute inflammation in LPS-induced murine immune cells
L. B. Naler, Y.-P. Hsieh, S. Geng…·C. Lu
This study compares epigenomic and transcriptomic changes in murine monocytes under low-grade and acute inflammation induced by LPS, identifying pathway-specific responses and epigenetic regulation differences.
- EcologybioRxivPreprint
Effects of hydroelectric dam construction on spatio-temporal changes of land use land cover in Bui National Park, Ghana
This study analyzes spatio-temporal changes in land use and land cover in Bui National Park, Ghana, following hydroelectric dam construction, finding significant increases in built-up areas and water bodies and decreases in forest cover.
DOI 10.1101/2021.01.28.428667 - Plant BiologybioRxiv
Impact of Meteorological factors on wheat growth period and irrigation water requirement --A case study of the Beijing-Tianjin-Hebei region in China
C. Xu, C. Lu, J. Wang, Chuiyu Lu
This study examines how meteorological factors affect wheat irrigation water requirements in the Beijing-Tianjin-Hebei region from 2000 to 2019, showing trends and correlations with climate variables.
DOI 10.1016/j.uclim.2021.100971 - Animal Behavior & CognitionbioRxivPreprint
AlphaTracker: A Multi-Animal Tracking and Behavioral Analysis Tool
Z. Chen, R. Zhang, Y. E. Zhang…·C. Lu
AlphaTracker is a computer vision tool for multi-animal tracking and behavioral analysis, designed for ease of use and real-time performance in studying social interactions in mice.
- Cancer BiologybioRxivPreprint
HOCMO: A Tensor-based Higher-Order Correlation Model to Deconvolute Epigenetic Microenvironment in Breast Cancer
C. Lu, R. Sherpa, L. Klindziuk…·S. Mollah
HOCMO is a tensor-based model that deconvolutes epigenetic microenvironment signals in breast cancer using proteomics data to reveal regulatory dynamics and functional modules.
DOI 10.1101/2020.12.01.406249 - PhysiologybioRxiv
Target lipidomics reveals associations between serum sphingolipids and insulin sensitivity by the glucose clamp
J. Ye, X. Ye, W. Jiang…·H. Zhou
This study identifies serum sphingolipids associated with insulin sensitivity using lipidomics and glucose clamp techniques, finding SM/Cer and SM d18:0/26:0 as potential biomarkers.
DOI 10.1016/j.diabres.2021.108699 - Evolutionary BiologybioRxiv
The Himalayan Uplift and the Evolution of Aquatic Biodiversity Across Asia: Snowtrout (Cyprininae: Schizothorax) as a Test Case
B. Regmi, M. R. Douglas, D. R. Edds…·M. E. Douglas
This paper tests the hypothesis that Himalayan uplift dispersed aquatic biodiversity by analyzing the phylogeography of Snowtrout fish across Asia.
DOI 10.1371/journal.pone.0289736 - MicrobiologySciencePeer-reviewed
A single-cell RNAseq atlas of the pathogenic stage of Schistosoma mansoni identifies a key regulator of blood feeding
G. Wendt, L. Zhao, R. Chen…·J. Collins
This study uses single-cell RNAseq to analyze adult Schistosoma mansoni parasites, identifying a key regulator of blood feeding and gut maintenance.
DOI 10.1126/science.abb7709 - Cell BiologybioRxiv
Membrane-type 1 matrix metalloproteinase (MMP-14) modulates tissue homeostasis by a non-proteolytic mechanism
M. G. Attur, C. Lu, X. Zhang…·P. Mignatti
This study shows that MT1-MMP regulates tissue homeostasis via a non-proteolytic mechanism by controlling skeletal stem cell differentiation, independent of its proteolytic activity.
DOI 10.1016/j.isci.2020.101789 - MicrobiologyFrontiers in Bioengineering and BiotechnologyPeer-reviewed
CRISPR/Cpf1 mediated genome editing enhances Bombyx mori resistance to BmNPV
Z. Dong, Q. Qin, Z. Hu…·M. Pan
This study compares CRISPR/Cpf1 orthologs for genome editing efficiency and antiviral ability in silkworms, finding FnCpf1 more effective than SpCas9 against BmNPV.
DOI 10.3389/fbioe.2020.00841 - Plant BiologybioRxivPreprint
bHLH11 inhibits bHLH IVc proteins by recruiting the TOPLESS/TOPLESS-RELATED corepressors in Arabidopsis
Y. Li, R. Lei, M. Pu…·G. Liang
The paper identifies bHLH11 as a negative regulator of Fe homeostasis in Arabidopsis, showing it inhibits bHLH IVc transcription factors by recruiting TOPLESS/TOPLESS-RELATED corepressors.
DOI 10.1101/2020.04.09.035097 - Plant BiologybioRxiv
FER-LIKE FE DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (OsFIT) interacts with OsIRO2 to regulate iron homeostasis
D. Yu, G. Liang, H. M. Zhang…·P. Xu
OsFIT interacts with OsIRO2 to enhance its nuclear accumulation and activate Fe-uptake gene expression in rice.
DOI 10.1111/jipb.12933 - Cell BiologybioRxivPreprint
Osmotic stress-induced, rapid clustering of IGF2BP proteins nucleates stress granule assembly
W.-J. Zeng, C. Lu, Y. Shi…·J. Yao
The paper shows IGF2BP proteins rapidly cluster under osmotic stress, initiating stress granule formation before other proteins, and identifies the molecular mechanisms involved.
- BiochemistrybioRxivPreprint
PulseDIA: in-depth data independent acquisition mass spectrometry using enhanced gas phase fractionation
PulseDIA improves DIA-MS specificity and sensitivity by using gas phase fractionation, achieving higher protein identification rates in cancer proteomics.
DOI 10.1101/787705 - Cancer BiologyThe CRISPR JournalPeer-reviewed
VHL Synthetic Lethality Signatures Uncovered by Genotype-specific CRISPR-Cas9 Screens
N. Sun, S. Petiwala, C. Lu…·N. Chung
The paper uses CRISPR-Cas9 screens in isogenic ccRCC cell lines to identify synthetic lethal partners of VHL, revealing new therapeutic targets for renal cell carcinoma.
DOI 10.1089/crispr.2019.0018 - MicrobiologybioRxiv
Design and assessment of TRAP-CSP fusion antigens as effective malaria vaccines
C. Lu, G. Song, K. Beale…·T. A. Springer
This study designs and evaluates TRAP-CSP fusion antigens as malaria vaccines, finding that those containing the CSP repeat region provide complete sterile protection in mice.
DOI 10.1371/journal.pone.0216260 - Cancer BiologybioRxiv
CRISPR-Cas9 screening of KSHV-transformed cells identifies XPO1 as a vulnerable target of cancer cells
M. Gruffaz, H. Yuan, W. Meng…·S.-J. Gao
This study identifies XPO1 as a vulnerable target in cancer cells using CRISPR-Cas9 screening in KSHV-transformed cells, showing its role in cell proliferation and growth transformation.
DOI 10.1128/mbio.00866-19 - BiochemistrybioRxiv
LRRC33 is a novel binding and regulating protein of TGF-β1 function in human acute myeloid leukemia cells
W. Ma, Y. Qin, B. Chapuy, C. Lu
This study identifies LRRC33 as a novel TGF-β1 binding and regulating protein in AML cells, showing its correlation with TGF-β1 expression and its role in TGF-β1 activation.
DOI 10.1371/journal.pone.0213482 - BioengineeringbioRxiv
Construction and Characterization of a Synthetic Baculovirus-inducible 39K Promoter
This paper constructs a synthetic inducible promoter by analyzing the 39K promoter of BmNPV and identifies key regulatory regions for virus-inducible activity.
DOI 10.1186/s13036-018-0121-8 - Cell BiologybioRxiv
Osteoblastic PLEKHO1 contributes to joint inflammation in rheumatoid arthritis
X. He, J. Liu, C. Liang…·A. Lu
This study shows that PLEKHO1 in osteoblasts worsens joint inflammation in RA and promotes bone formation, suggesting it as a therapeutic target.
DOI 10.1016/j.ebiom.2019.02.009 - Cancer BiologybioRxiv
Autophagy determines osimertinib resistance through regulation of stem cell-like properties in EGFR-mutant lung cancer
L. Li, Y. Wang, L. Jiao…·Y. He
This study shows autophagy promotes osimertinib resistance in EGFR-mutant lung cancer by enhancing stem-cell like properties, and inhibiting autophagy reverses resistance.
DOI 10.1016/j.canlet.2019.03.027 - BiochemistrybioRxiv
Fusion surface structure, function, and dynamics of gamete fusogen HAP2
J. Feng, X. Dong, J. F. Pinello…·T. Springer
This study characterizes the structure, function, and dynamics of the gamete fusogen HAP2, revealing dynamic regions and structural features critical for fusion.
DOI 10.7554/elife.39772 - MicrobiologybioRxiv
Repurposing cytarabine for treating primary effusion lymphoma by targeting KSHV latent and lytic replications
M. Gruffaz, S. Zhou, K. Vasan…·S.-J. Gao
This study identifies cytarabine as a potent inhibitor of KSHV-induced primary effusion lymphoma by targeting both viral and host DNA/RNA synthesis and inducing tumor regression in a xenograft model.
DOI 10.1128/mbio.00756-18 - BiochemistrybioRxiv
Prodomain-Growth Factor Swapping in the Structure of pro-TGF-β1
B. Zhao, S. Xu, X. Dong…·T. A. Springer
The paper determines the structure of pro-TGF-β1 with a cleavage site mutation, revealing prodomain-GF domain swapping in the dimeric structure and its implications for TGF-β biosynthesis.
DOI 10.1074/jbc.m117.809657