Author

D. Cui

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5 Cell Biology· 4 Biochemistry· 1 Bioengineering· 1 Cancer Biology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 11 Organism:human· 8 Research Focus:cell type annotation· 6 Research Focus:host-pathogen & immune response· 5 Assay:imaging· 4 Organism:mouse· 4 Research Focus:cell signaling & trafficking· 3 Research Focus:chromatin & epigenetic regulation· 2

Frequent Co-Authors

H. Fu· 4 shared J. Hossain· 4 shared J. Li· 4 shared J. R. Barnes· 4 shared L. Wang· 4 shared N. Jiang· 4 shared B. Zhou· 3 shared C. Zhang· 3 shared

Activity by Year

2018-2024 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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4 shared papersCell Biology

H. Fu

Mutual co-authors in cluster

Author profile →

13 papers

Recent·Most cited

BOOST: a robust ten-fold expansion method on hour-scale

J. Guo, H. Yang, C. Lu, D. Cui, M. Zhao, C. Li, W. Chen, Q. Yang, Z. Li, M. Chen, S. Zhao, J. Zhou, J. He, H. Jiang

BOOST is a rapid expansion microscopy method that achieves ~10x linear expansion in 90 minutes using microwave-assisted chemistry, improving throughput for various biological specimens.

bioRxiv · Jul 11, 2024Bioengineering

Pathological axonal enlargement in connection with amyloidosis, lysosome destabilization and hemorrhage is a major defect in Alzheimer's disease

H. Fu, J. Li, C. Zhang, G. Gao, Q. Ge, X. Guan, D. Cui

This study identifies axonal enlargement linked to amyloidosis, lysosome destabilization, and hemorrhage as a key pathological feature in Alzheimer's disease.

bioRxiv · Jun 10, 2024Cell Biology

The 3D ultrastructural morphology of a marine ammonia-oxidizing archaeon

Y. Zhou, A. Yan, J. Yang, W. He, S. Guo, Y. Li, Y. Dai, X. Pan, D. Cui, W. Teng, O. Pereira, R. Bi, S. Chen, L. Fan, P. Wang, , Z. Liu

This study uses cryo-ET and STEM-EDS to reveal the ultrastructural morphology and elemental composition of Nitrosopumilus maritimus SCM1, identifying two types of storage granules.

bioRxiv · Dec 12, 2023Microbiology

Aβ-aggregation-generated blue autofluorescence illuminates senile plaques, complex blood and vascular pathologies in the Alzheimer's disease

H. Fu, J. Li, C. Zhang, P. Du, G. Gao, Q. Ge, X. Guan, D. Cui

bioRxiv · Jul 6, 2023Cell Biology

Bivalent mRNA vaccine improves antibody-mediated neutralization of many SARS-CoV-2 Omicron lineage variants

N. Jiang, L. Wang, M. Hatta, C. Feng, M. Currier, X. Lin, J. Hossain, D. Cui, B. R. Mann, N. A. Kovacs, W. Wang, G. Atteberry, M. Wilson, R. Chau, K. A. Lacek, , B. Zhou

This study evaluates the neutralizing antibody response to bivalent mRNA vaccines against multiple Omicron variants, showing enhanced neutralization against BQ.1 and BQ.1.1.

bioRxiv · Jan 8, 2023 · PreprintMicrobiology

Differential neutralization and inhibition of SARS-CoV-2 variants by antibodies elicited by COVID-19 mRNA vaccines

L. Wang, M. H. Kainulainen, N. Jiang, H. Di, G. Bonenfant, L. Mills, M. Currier, P. Shrivastava-Ranjan, B. M. Calderon, M. Sheth, B. R. Mann, J. Hossain, X. Lin, S. Lester, E. Pusch, , Davis

This study evaluates how well antibodies from mRNA vaccines neutralize SARS-CoV-2 variants, finding that Omicron shows the most escape but booster doses maintain moderate neutralizing activity.

bioRxiv · Nov 24, 2021Microbiology

A chromosome-level reference genome of Ensete glaucum gives insight into diversity, chromosomal and repetitive sequence evolution in the Musaceae

Z. Wang, M. Rouard, M. K. Biswas, G. Droc, D. Cui, N. Roux, F.-C. Baurens, X.-J. Ge, T. Schwarzacher, J. Heslop-Harrison, Q. Liu

This paper presents a chromosome-level genome of Ensete glaucum, revealing insights into chromosomal evolution and repetitive sequence dynamics in the Musaceae family.

bioRxiv · Nov 23, 2021Plant Biology

Emergence of an adaptive epigenetic cell state in human bladder urothelial carcinoma evolution

Y. Xiao, W. Jin, K. Qian, K. Wu, G. Wang, W. Jiang, R. Cao, L. Ju, Y. Zhao, H. Zheng, T. Liu, L. Chang, Z. Xu, T. Wang, J. Luo, , X. Wang

This study identifies a TM4SF1-positive cancer subpopulation in bladder cancer that drives intratumor heterogeneity and is associated with poor prognosis.

bioRxiv · Oct 30, 2021 · PreprintCancer Biology

SARS-CoV-2 susceptibility of cell lines and substrates commonly used in diagnosis and isolation of influenza and other viruses

L. Wang, X. Fan, G. Bonenfant, D. Cui, J. Hossain, N. Jiang, G. Larson, M. Currier, J. Liddell, M. Wilson, A. Tamin, J. Harcourt, J. Ciomperlik-Patton, H. Pang, N. Dybdahl-Sissoko, , B. Zhou

This study evaluates SARS-CoV-2 susceptibility in cell lines used for influenza and other virus diagnosis, finding that some are permissive while others are not, with MDCK cells being insusceptible due to low ACE2 expression.

bioRxiv · Jan 4, 2021Microbiology

SARS-CoV-2 spike D614G variant confers enhanced replication and transmissibility

B. Zhou, T. T. N. Thao, D. Hoffmann, A. Taddeo, N. Ebert, F. Labroussaa, A. Pohlmann, J. King, J. Portmann, N. J. Halwe, L. Ulrich, B. S. Trueb, J. N. Kelly, X. Fan, B. Hoffmann, , M. Beer

This study shows the SARS-CoV-2 D614G variant has enhanced replication and transmissibility in animal models, explaining its global dominance.

bioRxiv · Oct 27, 2020Microbiology

Senile plaques in Alzheimer's disease arise from Aβ and Cathepsin D-enriched amyloidogenic mixtures out of intravascular hemolysis and Charcot-Bouchard aneurysm-related vascular degeneration

H. Fu, J. Li, P. Du, W. Jin, G. Gao, D. Cui

This study identifies that senile plaques in Alzheimer's disease originate from Aβ and Cathepsin D-enriched amyloid mixtures formed through intravascular hemolysis and vascular degeneration.

bioRxiv · May 17, 2020Cell Biology

Metabolic wastes are extracellularly disposed by excretosomes, nanotubes and exophers in mouse HT22 cells through an autophagic vesicle clustering mechanism

H. Fu, J. Li, P. Du, W. Jin, D. Cui

This study identifies excretosomes and exophers as mechanisms for metabolic waste disposal in HT22 cells, showing their role in stress response and neurodegenerative disease pathology.

bioRxiv · Jul 11, 2019 · PreprintCell Biology

Intron-mediated enhancement boosts Rtn4 circRNA expression: A robust method for exploring circRNA function

D. Mo, X. Li, D. Cui, J.-F. Vollmar

The paper demonstrates that intron-mediated enhancement significantly boosts circRNA expression and enables translation into detectable proteins, offering a robust method for studying circRNA functions.

bioRxiv · Aug 22, 2018Biochemistry