Author
H. Zheng
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2016-2025 · peak 24/yrCo-Author Collaboration Network
10 top collaborators · 36 mutual co-author links96 papers
Recent·Most cited
- PathologyJournal of Integrative AgriculturePeer-reviewedDOI 10.1016/j.jia.2024.01.027
- MicrobiologyNew PhytologistPeer-reviewed
Golgi-associated retrograde protein (GARP) complex recruits retromer to trans-Golgi network for FgKex2 and FgSnc1 recycling, necessary for development and pathogenicity of Fusarium graminearum
Y. Long, X. Chen, J. Chen…·W. Zheng
This study identifies the GARP complex as a mediator that recruits retromer to the trans-Golgi network, facilitating the recycling of FgKex2 and FgSnc1, which is essential for growth, development, and pathogenicity of Fusarium graminearum.
DOI 10.1111/nph.70006 - ImmunologyCell ReportsPeer-reviewed
Systems immunology of transcriptional responses to viral infection identifies conserved antiviral pathways across macaques and humans
K. Ratnasiri, H. Zheng, J. Toh…·P. Khatri
The paper identifies conserved antiviral pathways across macaques and humans using transcriptomic data from viral infections, showing shared and virus-specific responses that inform pandemic preparedness.
DOI 10.1016/j.celrep.2024.113706 - Cancer BiologybioRxiv
Targeting the mSWI/SNF Complex in POU2F-POU2AF Transcription Factor-Driven Malignancies
T. He, L. Xiao, Y. Qiao…·A. M. Chinnaiyan
This study identifies a therapeutic vulnerability in POU2F-POU2AF-driven cancers by showing that targeting the mSWI/SNF complex with a PROTAC degrader reduces tumor growth in preclinical models.
DOI 10.1016/j.ccell.2024.06.006 - MicrobiologybioRxivPreprint
Chlamydial protease-like activating factor targets SLC7A11 for degradation to induce ferroptosis and facilitate dissemination.
W. Chen, X. Su, Y. Pan…·H. Zheng
This study identifies CPAF-mediated degradation of SLC7A11 as a mechanism for Chlamydia-induced ferroptosis, promoting bacterial dissemination and suggesting therapeutic targeting.
DOI 10.1101/2023.12.20.572489 - MicrobiologybioRxivPreprint
The Legionella collagen-like protein employs a unique binding mechanism for the recognition of host glycosaminoglycans
S. Rehman, A. Antonovic, I. McIntire…·J. Garnett
This study determines the crystal structure of Legionella collagen-like protein and reveals its unique binding mechanism for sulphated glycosaminoglycans.
DOI 10.1101/2023.12.10.570962 - EcologybioRxivPreprint
Molecular Forecasting of Domoic Acid during a Pervasive Toxic Diatom Bloom
J. K. Brunson, M. Thukral, J. P. Ryan…·A. E. Allen
The paper identifies molecular predictors of domoic acid production during a harmful algal bloom and links iron and silica co-limitation to bloom dynamics and toxicity.
DOI 10.1101/2023.11.02.565333 - MicrobiologybioRxivPreprint
High Resolution Biological and Physical Sampling Reveals Expression of Domoic Acid Biosynthetic Genes at Frontal Zones
M. Thukral, A. T. Aron, A. J. Rabines…·A. E. Allen
This study combines high-resolution physical and multi-omic sampling to identify DA biosynthetic gene expression in frontal zones of Monterey Bay during declining upwelling.
DOI 10.1101/2023.10.19.562961 - Cell BiologybioRxiv
TFEB degradation is regulated by an IKK/β-TrCP2 phosphorylation-ubiquitination cascade
Y. Xiong, J. Sharma, M. N. Young…·M. Sardiello
This study identifies an IKK/β-TrCP2 phosphorylation-ubiquitination cascade that regulates TFEB stability, independent of other regulators.
DOI 10.1038/s41467-026-71001-1 - Cell BiologybioRxivPreprint
Quantitative Profiling of Lysosomal pH Heterogeneity using Fluorescence Lifetime Imaging Microscopy
D. Deng, Y. Guan, B. Wang…·M. C. Wang
This paper introduces a FLIM-based method to quantitatively analyze lysosomal pH heterogeneity in mammalian cells and C. elegans, revealing pH differences and dynamics without transgenic reporters.
DOI 10.1101/2023.09.25.559395 - ImmunologybioRxiv
A novel MARV glycoprotein-specific antibody with potentials of broad-spectrum neutralization to filovirus
Y. Zhang, M. Zhang, H. Wu…·G. Chen
This study identifies a novel human antibody, AF-03, that targets MARV glycoprotein and shows neutralizing activity against MARV and related filoviruses.
DOI 10.7554/elife.91181 - Evolutionary BiologybioRxiv
Predictive evolutionary modelling for influenza virus by site-based dynamics of mutations
J. Lou, W. Liang, L. Cao…·M. H. Wang
A computational model predicts influenza virus evolution and aids in vaccine strain selection by modeling site-wise mutation dynamics.
DOI 10.1038/s41467-024-46918-0 - Cancer BiologybioRxivPreprint
Osteoclast-Cancer Cell Metabolic Symbiosis Renders PARP Inhibitor Therapy Resistance in Bone Metastasis
H. Fan, Z. Xu, K. Yao…·H. Zheng
This study identifies a metabolic symbiosis between osteoclasts and cancer cells in bone metastasis that contributes to PARP inhibitor resistance, showing that targeting this interaction with PARPi and zoledronate can synergistically reduce metastasis.
DOI 10.1101/2023.08.15.553338 - Cancer BiologybioRxiv
Tafazzin Mediates Tamoxifen Resistance by Regulating Cellular Phospholipid Composition in ER-Positive Breast Cancer
X. Li, Y. Zhang, T. Zhang…·H. Zheng
This study identifies Tafazzin's role in tamoxifen resistance by regulating phospholipid composition in ER+ breast cancer cells, showing that TAZ depletion promotes resistance via an LPC-LPA axis.
DOI 10.1038/s41417-023-00683-2 - Cell BiologybioRxivPreprint
Lymphotoxin-β Promotes Bone Colonization and Osteolytic Outgrowth of Indolent Bone Metastatic cells of Breast Cancer
X. Wang, T. Zhang, B. Zheng…·H. Zheng
This study identifies lymphotoxin-β as a key factor promoting bone colonization and osteolytic outgrowth of breast cancer metastatic cells.
DOI 10.1101/2023.08.15.553179 - Cell BiologybioRxivPreprint
Unlocking the Role of Endothelial MPL Receptor and JAK2V617F Mutation: Insights into Cardiovascular Dysfunction in MPNs and CHIP
H. Zhang, N. Kafeiti, S. Lee…·H. Zhan
This study shows that JAK2V617F mutations in endothelial cells cause cardiovascular dysfunction by promoting EndMT, and inhibiting the MPL receptor can prevent this effect.
- PathologybioRxiv
Circulating Sex-specific Markers of Plaque Instability in Women and Men with Severe Carotid Atherosclerosis
K. Gasbarrino, H. Zheng, S. S. Daskalopoulou
This study identifies sex-specific circulating markers of plaque instability in men and women with severe carotid atherosclerosis, showing differences in immune and lipid profiles between sexes.
DOI 10.1161/strokeaha.123.044840 - ImmunologybioRxivPreprint
CytoSIP: An annotated structural atlas for interactions involving cytokine or cytokine receptor
L. Wang, F. Sun, H. Ma…·H. Zheng
CytoSIP provides a database of cytokine-cytokine receptor interactions with SNPs, interfaces, and disease associations to aid drug design and precision medicine.
DOI 10.1101/2023.06.05.543615 - MicrobiologybioRxivPreprint
ZBP1-mediated macrophage necroptosis inhibits ASFV replication
K. Zhang, Y. Hao, B. Yang…·H. Zheng
This study identifies ZBP1-mediated macrophage necroptosis as a mechanism that inhibits ASFV replication by promoting proinflammatory cytokine release.
DOI 10.1101/2023.04.25.538262 - MicrobiologybioRxiv
Massive expansion of the pig gut virome based on global metagenomic mining
J. Mi, X. Jing, C. Ma…·H. Zheng
This study establishes the Pig Virome Database (PVD) by mining global metagenomic data, revealing extensive viral diversity and functional potential in the pig gut.
DOI 10.1038/s41522-024-00554-0 - MicrobiologybioRxivPreprint
Inhibition of host N-myristoylation compromises the infectivity of SARS-CoV-2 due to Golgi-bypassing egress from lysosomes and endoplasmic reticulum
S. H. Saber, M. R. Shaker, J. Sng…·M. Joensuu
This study shows that inhibiting host N-myristoylation reduces SARS-CoV-2 infectivity by impairing viral envelope protein maturation and causing Golgi-bypassing egress.
DOI 10.1101/2023.03.03.530798 - Cancer BiologybioRxivPreprint
Histone demethylase KDM2A is a selective vulnerability of cancers relying on alternative telomere maintenance
F. Li, Y. Wang, I. Hwang…·H. Zheng
The paper identifies KDM2A as a selective vulnerability in ALT-dependent cancers by showing its role in telomere cluster dissolution through SENP6-mediated SUMO deconjugation.
DOI 10.1101/2023.02.10.528023 - Plant BiologybioRxiv
CALCIUM-DEPENDENT PROTEIN KINASE32 regulates cellulose biosynthesis through post-translational modification of cellulose synthase
The paper identifies CPK32 as a kinase that phosphorylates CESA3, affecting CSC motility and stability, thereby regulating cellulose biosynthesis.
DOI 10.1111/nph.19106 - Cancer BiologybioRxivPreprint
Profiling extracellular vesicles in circulation enables the early detection of ovarian cancer
H. Lee, D. M. Dinulescu, C. M. Castro…·B. R. Reuda
This study develops an extracellular vesicle-based test to detect early-stage high-grade serous ovarian cancer with high sensitivity and specificity using markers identified from murine models and validated in a human pilot study.
- MicrobiologybioRxivPreprint
Engineered symbiotic bacteria interfering Nosema redox system inhibit microsporidia parasitism in honeybees
H. Lang, H. Wang, H. Wang…·H. Zheng
The paper shows engineered symbiotic bacteria can inhibit microsporidia infection in honeybees by delivering RNAi targeting the parasite's redox system.
DOI 10.1101/2023.01.13.524015 - Cell BiologybioRxivPreprint
Loss of PTPMT1 limits mitochondrial utilization of carbohydrates and leads to muscle atrophy and heart failure in tissue-specific knockout mice
H. Zheng, Q. Li, S. Li…·C.-K. Qu
This study shows that PTPMT1 deletion in skeletal muscle and heart causes metabolic inflexibility, leading to atrophy, heart failure, and death, while liver and adipose tissue deletion has no effect.
DOI 10.1101/2023.01.09.523031 - BiochemistrybioRxivPreprint
A pilot study of stable isotope fractionation in Bombyx mori rearing
This study measures stable isotope fractionation in Bombyx mori strains across life stages to trace isotope movement and understand fractionation patterns.
DOI 10.1101/2023.01.08.523185 - Plant BiologybioRxivPreprint
Large-scale analysis of the N-terminal regulatory elements of the kinase domain in plant receptor-like kinase family
Q. Fu, Q. Liu, R. Zhang…·H. Zheng
The paper analyzes NRE sequences in RLKs and RLCKs from 528 plants to uncover structural-functional relationships and phosphorylation motifs, revealing their role in kinase regulation.
DOI 10.1101/2022.12.10.519927 - EcologybioRxiv
Taming the data deluge: a novel end-to-end deep learning framework for classifying marine biological and environmental images
H. Bi, Y. Cheng, X. Cheng…·K. Ying
The paper introduces a deep learning framework that improves classification of marine images by using scene classification to enhance accuracy in diverse underwater environments.
DOI 10.1002/lom3.10591