Author
F. Liu
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
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2017-2025 · peak 21/yrCo-Author Collaboration Network
10 top collaborators · 26 mutual co-author links88 papers
Recent·Most cited
- ImmunologybioRxiv
Mouse model of SARS-CoV-2 reveals inflammatory role of type I interferon signaling
B. Goldman-Israelow, E. Song, T. Mao…·A. Iwasaki
This paper develops a mouse model of SARS-CoV-2 using AAV-mediated hACE2 expression, showing type I interferons fail to control viral replication and drive pathology.
DOI 10.1084/jem.20201241 - BioengineeringbioRxivPreprint
A Study of Coronary Artery Disease in the Left Circumflex Artery via Artificial Vessel Restoration
This study compares blood flow dynamics in a diseased left circumflex artery and its artificially restored version to identify flow characteristics linked to coronary artery disease risk.
DOI 10.1101/2020.05.27.119628 - Evolutionary BiologybioRxiv
Molecular species delimitation in the primitively segmented spider genus Heptathela endemic to Japanese islands
X. Xu, M. Kuntner, J. E. Bond…·D. Li
The paper uses a two-step molecular approach to delimit species in the spider genus Heptathela, identifying 20 putative species from 180 sampled individuals.
DOI 10.1016/j.ympev.2020.106900 - BiochemistrybioRxiv
Expanding the depth and sensitivity of cross-link identification by differential ion mobility using FAIMS
L. Schnirch, M. Nadler-Holly, S.-W. Siao…·F. Liu
This study improves cross-link identification in XL-MS by using FAIMS to enhance separation and sensitivity, increasing identification rates by 23-56%.
DOI 10.1021/acs.analchem.0c01273 - Cancer BiologybioRxiv
Double-targeted knockdown of miR-21 and CXCR4 inhibits malignant glioma progression by suppression of the PI3K/AKT and Raf/MEK/ERK pathways
This study shows that knocking down both miR-21 and CXCR4 inhibits glioma progression more effectively than single-targeted knockdown, by suppressing PI3K/AKT and Raf/MEK/ERK pathways.
DOI 10.1155/2020/7930160 - BiochemistrybioRxivPreprint
Structure-Based Design, Synthesis and Biological Evaluation of Peptidomimetic Aldehydes as a Novel Series of Antiviral Drug Candidates Targeting the SARS-CoV-2 Main Protease
W. Dai, B. Zhang, X.-M. Jiang…·H. Liu
This study designs, synthesizes, and evaluates two peptidomimetic aldehydes as antiviral drug candidates targeting SARS-CoV-2 main protease, showing potent inhibition and anti-infection activity.
DOI 10.1101/2020.03.25.996348 - BiochemistrybioRxivPreprint
Structure of RNA-dependent RNA polymerase from 2019-nCoV, a major antiviral drug target
Y. Gao, L. Yan, Y. Huang…·Z. Rao
The paper reports the cryo-EM structure of 2019-nCoV RdRp complexed with cofactors, revealing key residues and remdesivir binding, aiding antiviral drug design.
DOI 10.1101/2020.03.16.993386 - BiochemistrybioRxiv
Structure of Mpro from COVID-19 virus and discovery of its inhibitors
The paper identifies a mechanism-based inhibitor of the COVID-19 virus main protease through structure-assisted drug design and high-throughput screening.
DOI 10.1038/s41586-020-2223-y - EcologybioRxivPreprint
Lower Soil Carbon Loss Due to Persistent Microbial Adaptation to Climate Warming
X. Guo, Q. Gao, M. Yuan…·J. Zhou
This study shows that microbial adaptation reduces soil carbon loss under long-term warming by decreasing temperature sensitivity of respiration.
DOI 10.1101/2020.02.23.961300 - Plant BiologybioRxiv
Transcriptomic and Proteomic Analyses of a New Cytoplasmic Male Sterile Line with wild Gossypium bickii. Genetic Background
H. Zhao, J. Wang, Y. Qu…·J. Huang
The paper analyzes transcriptomic and proteomic data from a new cytoplasmic male sterile cotton line to identify differentially expressed genes and proteins involved in microspore abortion.
DOI 10.1186/s12864-020-07261-y - Cell BiologybioRxiv
SPARC promotes insulin secretion through down-regulation of RGS4 protein in pancreatic beta-cells
L. Hu, F. He, M. Huang…·Y.-S. Dai
This study shows SPARC enhances insulin secretion by reducing RGS4 in pancreatic beta-cells, improving glucose tolerance in SPARC-deficient mice.
DOI 10.1038/s41598-020-74593-w - BiophysicsbioRxiv
Tuning cell motility via cell tension with a mechanochemical cell migration model
K. Tao, J. Wang, X. Kuang…·L. Zhang
This paper develops a mechanochemical model to study how cell tension affects migration, showing it inhibits movement under persistent stimuli but can enhance migration under random noise.
DOI 10.1016/j.bpj.2020.04.030 - Cell BiologybioRxiv
A microtranslatome coordinately regulates sodium and potassium currents in the heart
C. A. Eichel, E. B. Rios-Perez, F. Liu…·G. A. Robertson
The paper shows that mRNA transcripts for sodium and potassium channels form complexes during translation, coordinating their expression to regulate cardiac electrical activity.
DOI 10.7554/elife.52654 - Evolutionary BiologyiSciencePeer-reviewed
Genomic approaches reveal an endemic sub-population of gray wolves in Southern China
G.-D. Wang, M. Zhang, X. Wang…·Y.-P. Zhang
The paper analyzes ancient DNA from museum specimens to show that Southern Chinese gray wolves form a distinct sub-population with genetic links to an extinct canid related to dholes.
DOI 10.1016/j.isci.2019.09.008 - PhysiologybioRxiv
Transcriptome analysis of the Larimichthys polyactis under heat and cold stress
T. Chu, F. Liu, G. Qin…·B. Lou
This study identifies differentially expressed genes and pathways in small yellow croaker liver under heat and cold stress, providing insights into temperature stress responses for aquaculture improvement.
DOI 10.1016/j.cryobiol.2020.06.014 - Cancer BiologybioRxiv
Suppression of membranous LRP5 recycling, WNT/β-catenin signaling, and colorectal tumorigenesis by 15-LOX-1 peroxidation of PI3P_linoleic acid
F. Liu, X. Zuo, Y. Liu…·I. Shureiqi
This study shows that 15-LOX-1 metabolism of LA in PI3P reduces LRP5 membrane levels, inhibits Wnt/β-catenin signaling, and suppresses colorectal tumorigenesis in mice.
DOI 10.1016/j.celrep.2020.108049 - PhysiologybioRxiv
Nutrient regulation of the islet epigenome controls adaptive insulin secretion
M. Wortham, F. Liu, J. Y. Fleischman…·M. Sander
This study shows that nutrient-stimulated histone acetylation regulates the islet epigenome to control adaptive insulin secretion, with Lsd1 playing a key role in this process.
- MicrobiologybioRxivPreprint
HIV-1 Nef interacts with LMP7 to attenuate immunoproteasome formation and MHC-I antigen presentation
This study shows HIV-1 Nef interacts with LMP7 to reduce immunoproteasome formation and MHC-I antigen presentation, aiding viral immune evasion.
DOI 10.1101/697946 - ImmunologybioRxivPreprint
STING recruits NLRP3 to the ER and deubiquitinates NLRP3 to activate the inflammasome
W. Wang, D. Hu, Y. Feng…·J. Wu
This study shows STING activates the NLRP3 inflammasome by recruiting NLRP3 to the ER and deubiquitinating it, enhancing IL-1β secretion and inflammatory responses.
- MicrobiologybioRxiv
Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics
H. Zhong, H. Ren, Y. Lu…·J. Li
The paper compares gut metagenomics and metaproteomics in prediabetics and treatment-naïve type 2 diabetics to identify host-microbial interplays across disease stages.
DOI 10.1016/j.ebiom.2019.08.048 - Plant BiologybioRxiv
The Catalytic Core of DEMETER Guides Active DNA Demethylation in Arabidopsis
C. Zhang, Y.-H. Hung, X.-Q. Zhang…·T.-F. Hsieh
This study identifies the catalytic core of DME as essential for active DNA demethylation in Arabidopsis, showing that the N-terminus is required for heterochromatin demethylation and specificity.
DOI 10.1073/pnas.1907290116 - PathologybioRxiv
The α-tubulin of Laodelphax striatellus facilitates the passage of rice stripe virus (RSV) and enhances horizontal transmission
Y. Li, D. Chen, J. Hu…·Danyu Chen, Jia Hu, Lu Zhang, Yin Xiang, Fang Liu, Yao Li
This study identifies α-tubulin in Laodelphax striatellus as a facilitator of rice stripe virus (RSV) passage through midgut and salivary glands, enhancing horizontal transmission.
DOI 10.1371/journal.ppat.1008710 - PhysiologybioRxiv
Integrated in vivo quantitative proteomics and nutrient tracing reveals age-related metabolic rewiring of pancreatic β-cell function
M. Wortham, J. R. Benthuysen, M. Wallace…·M. Sander
This study uses in vivo proteomics and nutrient tracing to show age-related metabolic changes in pancreatic β-cells improve glucose-stimulated insulin secretion.
DOI 10.1016/j.celrep.2018.11.031 - MicrobiologybioRxiv
Variation and inheritance of the Xanthomonas gene cluster required for activation of XA21-mediated immunity
F. Liu, M. McDonald, B. Schwessinger…·P. Ronald
The paper identifies the raxX-raxSTAB gene cluster in Xanthomonas species and shows its role in RaxX peptide production, which is required for XA21-mediated immunity but not for peptide hormone activity.
DOI 10.1111/mpp.12783 - Cell BiologybioRxiv
Quantitative Analysis of Interactive Behavior of Mitochondria and Lysosomes Using Structured Illumination Microscopy
Q. Chen, X. Shao, M. Hao…·J. Diao
The paper introduces an M-value to quantify mitochondria-lysosome contact and mitophagy using structured illumination microscopy, finding distinct M-value ranges for these processes.
DOI 10.1016/j.bpj.2018.11.1450 - BiophysicsbioRxiv
Super-Resolution Tracking of Mitochondrial Dynamics with An Iridium(III) Luminophore
Q. Chen, C. Jin, X. Shao…·J. Diao
The paper develops an iridium(III) dye for tracking mitochondrial dynamics under structured illumination microscopy, revealing new insights into mitochondria-lysosome interactions.
DOI 10.1002/smll.201802166 - Plant BiologybioRxiv
The Rice XA21 Ectodomain Fused to the Arabidopsis EFR Cytoplasmic Domain Confers Resistance to Xanthomonas oryzae pv. oryzae
N. C. Thomas, N. Oksenberg, F. Liu…·P. Ronald
The paper shows that expressing a chimeric receptor with XA21 ectodomain and EFR endodomain in rice confers resistance to Xoo, indicating the ectodomain is key for robust resistance.
DOI 10.7717/peerj.4456