Author
Z. Sun
University of Pittsburgh
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
Click to filter author papersSignature Assays, Organisms & Methods
Click to filter · or open tagActivity by Year
2017-2023 · peak 24/yrCo-Author Collaboration Network
10 top collaborators · 18 mutual co-author links88 papers
Recent·Most cited
- BiophysicsbioRxivPreprint
Crystal structure of the membrane (M) protein from a SARS-COV-2-related coronavirus
X. Wang, Y. Yang, Z. Sun, X. Zhou
The paper reports the first crystal structure of a coronavirus M protein from batCOV5 and identifies its interaction with the N protein.
DOI 10.1101/2022.06.28.497981 - ImmunologybioRxivPreprint
Circulating plasma IL-13 and periostin are dysregulated type 2 inflammatory biomarkers in prurigo nodularis: a cluster analysis
V. Parthasarathy, K. Cravero, J. Deng…·S. G. Kwatra
This study identifies elevated plasma IL-13 and periostin as type 2 inflammatory biomarkers in prurigo nodularis using clustering analysis of cytokine profiling.
DOI 10.1101/2022.06.07.495051 - PhysiologybioRxiv
Zmiz1 is required for mature β-cell function and mass expansion upon high fat feeding
T. A. Alghamdi, N. A. J. Krentz, N. Smith…·P. E. MacDonald
This study shows that Zmiz1 is essential for β-cell function and mass expansion in response to high fat feeding, linking its loss to diabetes.
DOI 10.1016/j.molmet.2022.101621 - ImmunologybioRxivPreprint
Delivery of Circular mRNA via Degradable Lipid Nanoparticles against SARS-COV-2 Delta Variant
K. Huang, N. Li, Y. Li…·Z. Sun
This study develops a stable and safe mRNA vaccine (cmRNA-1130) using degradable lipid nanoparticles against the SARS-CoV-2 Delta variant, showing potent immune responses and stability.
- Cancer BiologybioRxivPreprint
Glutamine is essential for overcoming theimmunosuppressive microenvironment in malignant salivary gland tumors
S. Cao, Y.-W. Hung, Y.-C. Wang…·D. K. Ann
This study shows that dietary glutamine supplementation enhances antitumor immunity by altering the tumor microenvironment in mice with malignant salivary gland tumors.
DOI 10.1101/2022.04.29.490103 - Cancer BiologybioRxivPreprint
Discovery of a novel human antibody VH domain with potent activity against mesothelin expressing cancer cells in both CAR T-cell and antibody drug conjugate formats
Z. Sun, X. Chu, C. Adams…·D. S. Dimitrov
The paper identifies a novel human antibody VH domain with high affinity for mesothelin and demonstrates its efficacy in both CAR-T cell and antibody drug conjugate formats against mesothelin-expressing cancer cells.
DOI 10.1101/2022.04.07.487497 - ImmunologybioRxivPreprint
Potent Neutralization of Omicron and other SARS-CoV-2 Variants of Concern by Biparatopic Human VH Domains
C. Chen, J. W. Saville, M. M. Marti…·W. Li
This study identifies a biparatopic VH domain that neutralizes SARS-CoV-2 VOCs, including Omicron, with high potency in vitro and in a mouse model.
- ImmunologybioRxivPreprint
Human NLRP1 is activated by ZAKa-driven ribotoxic stress response
K. S. ROBINSON, G. A. TOH, P. ROZARIO…·F. L. Zhong
This paper identifies ZAKa-driven ribotoxic stress as a mechanism for activating human NLRP1, leading to pyroptosis in response to UVB and microbial ribotoxins.
DOI 10.1101/2022.01.24.477516 - MicrobiologybioRxivPreprint
Comprehensive assessment of functional effects of commonly used sweeteners on ex vivo human gut microbiome
Z. Sun, W. Wang, L. Li…·D. Figeys
This study evaluates the functional effects of 21 common sweeteners on human gut microbiomes using metaproteomics, identifying potential prebiotic properties in certain sugar alcohols.
DOI 10.1101/2022.01.15.474735 - BiochemistrybioRxiv
Emerging SARS-CoV-2 Variants of Concern: Spike Protein Mutational Analysis and Epitope for Broad Neutralization
D. Mannar, J. W. Saville, Z. Sun…·S. Subramaniam
This study identifies a broadly neutralizing antibody fragment and analyzes spike protein mutations in SARS-CoV-2 variants to understand their structural and functional impacts on antibody evasion.
DOI 10.1038/s41467-022-32262-8 - Plant BiologybioRxivPreprint
DNA methylation in transposable elements disrupts the connection between three-dimensional chromatin organization and gene expression upon rice genome duplication.
Z. Sun, Y. Wang, Z. Song…·Y. Fang
This study investigates how DNA methylation in transposable elements disrupts the link between 3D chromatin organization and gene expression in rice after genome duplication.
DOI 10.1101/2021.12.15.472849 - MicrobiologybioRxivPreprint
Integrative interactome and ubiquitinome analyses reveal multiple regulatory pathways targeted by ICP0 in HSV-1 infected neuronal cells
F. Hou, Z. Sun, Y. Deng…·D. Pan
This study identifies and validates multiple novel targets of HSV-1 ICP0 in neuronal cells using proteomic approaches and functional experiments, revealing potential restrictive activities of SNX9 and OTUD4.
DOI 10.1101/2021.12.13.472348 - MicrobiologyBMC MicrobiologyPeer-reviewed
Study of growth, metabolism, and morphology of Akkermansia muciniphila with an in vitro advanced bionic intestinal reactor
This study cultivates Akkermansia muciniphila in a dynamic bionic intestinal reactor with different media, finding higher biomass and specific metabolites under human mucin conditions.
DOI 10.1186/s12866-021-02111-7 - Cancer BiologybioRxiv
Intratumoral Delivered Novel Circular mRNA Encoding Cytokines for Immune Modulation and Cancer Therapy
J. Yang, J. Zhu, Y. Chen…·C. Zuo
This paper develops a novel circular mRNA (C-RNA) platform for cancer therapy, showing it enhances anti-tumor immune responses and improves protein expression through optimized formulation.
DOI 10.1016/j.omtn.2022.09.010 - PhysiologybioRxivPreprint
Accumulation of auranofin in white adipose tissues lowers leptin levels and exerts anti-diabetic effects
A. R. Cox, P. M. Masschelin, P. Saha…·S. M. Hartig
The paper identifies auranofin as a drug that lowers leptin levels in white adipose tissue and improves insulin sensitivity in obese mice, with anti-diabetic effects.
DOI 10.1101/2021.09.11.459899 - MicrobiologymSystemsPeer-reviewed
A scale-free, fully connected global transition network underlies known microbiome diversity
G. Jing, Y. Zhang, L. Liu…·J. Xu
The paper constructs a global microbiome transition network showing microbiomes are closely connected despite habitat differences, with a scale-free structure and a roadmap of dispersal.
DOI 10.1128/msystems.00394-21 - Cell BiologybioRxiv
rRNA Biogenesis Regulates Mouse 2C-like State by 3D Structure Reorganization of Peri-Nucleolar Heterochromatin
H. Yu, Z. Sun, T. Tan…·J. Zhang
This study shows that disrupting rRNA biogenesis in mouse embryonic stem cells induces a 2C-like state through reorganization of peri-nucleolar heterochromatin and activation of the 2C program.
DOI 10.1038/s41467-021-26576-2 - MicrobiologybioRxivPreprint
COVID-ONE-humoral immune: The One-stop Database for COVID-19-specific Antibody Responses and Clinical Parameters
Z. Xu, Y. Li, Q. Lei…·S.-c. Tao
The paper introduces a database that compiles antibody responses and clinical data from COVID-19 patients for analysis and visualization.
DOI 10.1101/2021.07.29.454261 - Cell BiologybioRxivPreprint
LENG8 regulation of mRNA processing, is responsible for the control of mitochondrial activity
Y. Zhao, X. Wang, N. Li…·F. Liu
This study identifies LENG8 as an mRNA processing factor that regulates mitochondrial activity by controlling mRNA nuclear export and mitochondrial protein expression.
- Plant BiologybioRxivPreprint
Complete depletion of Arabidopsis linker histones impairs the correlations among chromatin compartmentalization, DNA methylation and gene expression
Z. Sun, M. Li, H. Zhnag…·Y. Fang
This study shows that complete depletion of linker histone H1 in Arabidopsis disrupts correlations between chromatin compartmentalization, DNA methylation, and gene expression.
DOI 10.1101/2021.07.08.451606 - Cell BiologybioRxivPreprint
Live-Cell Imaging of (p)ppGpp with RNA-based Fluorescent Sensors
Z. Sun, R. Wu, B. Zhao…·M. You
This paper develops RNA-based fluorescent sensors to directly image and measure (p)ppGpp in live bacterial cells, revealing cell-to-cell variation and dynamics under different nutritional conditions.
DOI 10.1101/2021.05.12.443921 - Plant BiologybioRxiv
The Arabidopsis thaliana PeptideAtlas; harnessing world-wide proteomics data for a comprehensive community proteomics resource
K. J. van Wijk, E. W. Deutsch, Q. Sun…·L. Mendoza
The paper develops the Arabidopsis PeptideAtlas, a proteomics resource integrating mass spectrometry data with metadata and community tools to enhance understanding of the Arabidopsis proteome.
DOI 10.1093/plcell/koab211 - PathologybioRxiv
Deep learning identifies pathological abnormalities predictive of graft loss in kidney transplant biopsies
Z. Yi, F. Salem, M. C. Menon…·W. Zhang
This paper develops a deep learning model to quantify pathological features in kidney transplant biopsies, showing improved prediction of graft loss compared to clinical and Banff scores.
- MicrobiologyJournal of BacteriologyPeer-reviewed
The Coxiella burnetii QpH1 plasmid is a virulence factor for colonizing bone marrow-derived murine macrophages
S. Luo, Z. Sun, H. Fan…·L. Song
This study shows that the QpH1 plasmid in Coxiella burnetii is essential for colonizing murine macrophages and highlights its role in the bacterium's persistence in rodents.
DOI 10.1128/jb.00588-20 - BiophysicsbioRxiv
Restriction of RecG translocation by DNA mispairing
Z. Sun, Y. Wang, M. Hashemi…·Y. L. Lyubchenko
This study investigates how DNA mispairing affects RecG helicase translocation using AFM, finding that certain mismatches block movement while others do not.
DOI 10.1016/j.bbagen.2021.130006 - ImmunologybioRxivPreprint
Neutralization of European, South African, and United States SARS-CoV-2 mutants by a human antibody and antibody domains
Z. Sun, A. Kim, M. D. Sobolewski…·W. Li
The paper evaluates an antibody domain's ability to neutralize SARS-CoV-2 variants with mutations in the RBD, showing it neutralizes the triple mutation variant but not others.
DOI 10.1101/2021.03.22.436481 - PhysiologybioRxivPreprint
A low sugar diet enhances Drosophila body size in males and females via sex-specific mechanisms
J. W. Millington, L. W. Wat, Z. Sun…·E. J. Rideout
This study shows that a low sugar diet increases body size in both male and female Drosophila larvae, but affects their insulin/TOR signaling and metabolism differently.
DOI 10.1101/2021.03.03.433819 - Plant BiologybioRxivPreprint
Sulfur limitation increases duckweed starch accumulation without compromising growth
Z. Sun, W. Guo, X. Zhao…·H. Hou
This study shows sulfur limitation increases duckweed starch yield without reducing growth, making it a promising method for biofuel production.
DOI 10.1101/2021.02.22.432231 - NeuroscienceMolecular PsychiatryPeer-reviewed
MAP2 is differentially phosphorylated in schizophrenia, altering its function
Melanie J. Grubisha, X. Sun, M L MacDonald…·Robert A. Sweet
This study identifies MAP2 phosphorylation changes in schizophrenia, linking them to neuronal structure and synaptic function impairments through phosphoproteomics and transgenic mouse models.
38 citations