Z. Fei

Related PP2C phosphatases Pic3 and Pic12 negatively regulate immunity in tomato to Pseudomonas syringae

This study identifies Pic3 and Pic12 as PP2C phosphatases that negatively regulate tomato immunity against Pseudomonas syringae through flagellin-independent pathways.

Ethylene and ROS Signaling Are Key Regulators of Lateral Root Development under Salt Stress in Tomato

This study identifies genes regulating lateral root development in tomato under salt stress, revealing ethylene and ROS signaling as key factors.

Molecular basis of one-step methyl anthranilate biosynthesis in grapes, sweet orange, and maize

The paper identifies one-step anthranilate methyltransferases in grapes that synthesize methyl anthranilate, revealing distinct active site residues compared to maize and citrus enzymes.

Genome sequencing of 'Fuji' apple clonal varieties reveals evolutionary history and genetic mechanism of the spur-type morphology

The paper sequenced clonal Fuji apple varieties to uncover somatic variants linked to spur-type morphology and early maturation traits.

Five-layered robot (F-robot) based on functionally graded multilayer foam antiviral low-carbon (F-MAX) system for Pathogenic Microorganism Elimination

The paper introduces an air filtration system using a multilayer composite with antiviral and antibacterial properties, suitable for both commercial and residential environments.

Epigenetic predictors of species maximum lifespan and other life history traits in mammals

The paper develops DNA methylation predictors for mammalian maximum lifespan, gestation time, and sexual maturity, showing species-level epigenetic signatures that differ from individual lifespan variation.

Pan-genome analysis of different morphotypes reveals genomic basis of Brassica oleracea domestication and differential organogenesis

This study constructs a pan-genome of Brassica oleracea to uncover genomic basis of domestication and organogenesis differences among morphotypes.

A Citrullus genus super-pangenome reveals extensive variations in wild and cultivated watermelons and sheds light on watermelon evolution and domestication

The paper constructs a Citrullus super-pangenome using genomic data from 547 watermelon accessions to uncover gene variations and insights into watermelon evolution and domestication.

Soil intake modifies the gut microbiota and alleviates ovalbumin-induced mice asthma inflammation

The paper shows that sterilized soil intake reduces asthma inflammation in mice by altering gut microbiota and shifting immune responses toward Th1.

Fundamental equations linking methylation dynamics to maximum lifespan in mammals

This study links methylation dynamics to maximum lifespan in mammals by showing a reciprocal relationship between methylation change rates and lifespan across species.

Maize COI1 quadruple-knockout mutants exhibit elevated DELLA protein accumulation, stunted growth, and reduced photosynthetic efficiency

This study investigates maize COI proteins' roles in growth and defense by analyzing mutants, finding that quadruple mutants show stunted growth, reduced photosynthesis, and DELLA protein accumulation.

Sterile Soil as Prebiotics Mitigate Intergenerational Loss of Gut Microbial Diversity and Anxiety-Like Behavior Induced by Antibiotics in mice

This study shows that sterile soil prebiotics can restore gut microbial diversity and alleviate anxiety-like behavior and intestinal barrier issues caused by antibiotic exposure across generations in mice.

Chromosome-level genome assembly of Torreya grandis provides insights into the origin and evolution of gymnosperm-specific sciadonic acid biosynthesis

The paper presents a chromosome-level genome assembly of T. grandis and identifies genes responsible for gymnosperm-specific sciadonic acid biosynthesis.

Horizontally transferred genes as RNA interference targets for aphid and whitefly control

This study identifies horizontally transferred genes (HTGs) in aphids and whiteflies as potential RNAi targets for pest control, showing they can be silenced without harming beneficial insects.

GLKs directly regulate carotenoid biosynthesis via interacting with GBFs in nuclear condensates in plants

This study identifies GLKs as regulators of carotenoid biosynthesis through GBF-dependent transcriptional activation and phase separation-mediated nuclear condensates.

Loss of function of bHLH transcription factor Nrd1 in tomato induces an arabinogalactan protein-encoding gene and enhances resistance to Pseudomonas syringae pv. tomato

This study shows that loss of Nrd1 function in tomato enhances resistance to Pseudomonas syringae pv. tomato by suppressing the defense gene Agp1.

Large-scale comparative small RNA analyses reveal genomic structural variants in driving expression dynamics and differential selection pressures on distinct small RNA classes during tomato domestication

The paper analyzes small RNA expression dynamics in tomato accessions to show how genomic structural variants influence different small RNA classes and their selection pressures during domestication.

Reference genome and resequencing of 305 accessions provide insights into spinach evolution, domestication and genetic basis of agronomic traits

This study presents a chromosome-scale spinach reference genome and resequences 305 accessions to explore evolution, domestication, and genetic basis of agronomic traits.

OPT3 Transports Copper to the Phloem, Mediates Shoot-to-Root Copper Signaling andCrosstalk Between Copper and Iron Homeostasis in A. thaliana

The paper identifies AtOPT3 as a phloem transporter that moves copper and iron, mediating shoot-to-root signaling and crosstalk between copper and iron homeostasis in A. thaliana.

Epigenetic predictors of maximum lifespan and other life history traits in mammals

The paper develops methylation-based models to predict maximum lifespan and other life history traits in mammals using data from 12,000 samples across 192 species.

DNA Methylation Networks Underlying Mammalian Traits

This study analyzes DNA methylation across 11,117 samples from 176 species to identify modules related to traits like age, lifespan, and phylogeny, revealing epigenetic patterns across evolution and aging.

Soil causes gut microbiota to flourish and total serum IgE levels to decrease in mice

The study shows that soil intake in mice increases gut microbial diversity and reduces serum IgE levels, suggesting potential prebiotic effects.

Genome sequencing sheds light on the contribution of structural variants to Brassica oleracea diversification

This study identifies structural variants in Brassica oleracea genomes that contribute to morphological divergence between cauliflower and cabbage.

Genome-wide association study reveals the genetic architecture of 27 yield-related traits in tomato

This study identifies 129 loci associated with 27 yield-related traits in tomato, explaining 8.8% of phenotypic variance, and highlights a candidate gene involved in leaf stomata formation and drought resistance.

Spelling changes and fluorescent tagging with prime editing vectors for plants

This paper develops and validates prime editing vectors for plants, enabling large insertions and fluorescent tagging in dicots and monocots.

Pan-genome analyses of peach and its wild relatives provide insights into the genetics of disease resistance and species adaptation

The paper performs pan-genome analysis of peach and its wild relatives to identify genetic variations related to disease resistance and high-altitude adaptation.

The Genome of the Charophyte Alga Penium margaritaceum Bears Footprints of the Evolutionary Origins of Land Plants

This study presents the genome of Penium margaritaceum, a charophyte alga, to explore evolutionary features leading to land plant colonization and identifies gene expansions and adaptations related to terrestrialization.

Melon ethylene-mediated transcriptome and methylome dynamics provide insights to volatile production

This study investigates ethylene's role in melon ripening by analyzing transcriptome and methylome changes, revealing connections between DNA methylation and volatile compound production.

Core Role of TRPC6 Channels in Regulating Airway Re-modelling in Chronic Obstructive Pulmonary Disease.

This study investigates the role of TRPC6 channels in COPD by showing nicotine increases TRPC6 expression and activity, leading to airway remodeling through NF-κB signaling and miR-135a/b-5p regulation.

ALUMINUM RESISTANCE TRANSCRIPTION FACTOR 1 (ART1) contributes to natural variation in rice Al resistance.

This study fine-maps an aluminum resistance QTL in rice and shows that ART1 interacts with genetic background to influence gene expression and Al resistance.